Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00086 |
Symbol | |
ID | 6778963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 87520 |
End bp | 88320 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642753516 |
Product | hypothetical protein |
Protein accession | YP_002124400 |
Protein GI | 196154911 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTATTC TTGGCTACAT CGCTGCTGTT CTTATGGGAA TGGTTTTAGG CGTAATAGGC GGAGGGGGTT CTATCCTCAC CGTGCCTATC CTCGTTTACT TAATGGGCGT TACGCCTGAT ATAGCTACCG GCTATTCTTT GCTTATTGTG GGTGCCACAG CCGCATTCGG CGCGGTAAGG TATTTCAAAG AAGGTCTAGT AGACGTTAAA GCGTCTATTT TATTTGCCGT GCCTTCCATC ATTGCTGTTT ATCTTTCAAG GGCCTACCTA ATGCCCGCCA TTCCCGAAAC TATTTCTTTT CAATCGCTAA CCATAGATAA GAACCTGGGC ATCATGGTGC TGTTTGCTGC ACTGATGTTG GCCTCGGCTG CCATGATGTT GAAAAAGGCT TATAGCAAAT CGACGCCAGC AACACAGGTC ATTGAGAAAA AACAACCCAA CATTGGGCTG ATAGTTATTG AAGGCGCAGT AGTGGGTGTT GTTACCGGCA TACTCGGCGC AGGCGGTGGC TTTCTTATCA TACCCGCCTT GGTACTTATT TTAGGCATGC CCATGAAAAA CGCGGTGGGC GCGTCTTTAT TCATTATCGC CTTAAAGTCG TTGCTTGGCT TCGTAGGCGA CCTACAAACC GGAATTCAAT TGGAGATGCC TTTGCTGCCG CTTATGTTGG TAGCCACGTT TATTGGGATG GCAGTCTCCA CGAAGGTAGC GGGAAAACTA GATGGTGCAG CTTTGCAGAA GTTCTTTGCA TTTTTCACTC TAGTTATTGC CGTTTTTATC ATGACCAAAG AGCTTCTTTA G
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Protein sequence | MIILGYIAAV LMGMVLGVIG GGGSILTVPI LVYLMGVTPD IATGYSLLIV GATAAFGAVR YFKEGLVDVK ASILFAVPSI IAVYLSRAYL MPAIPETISF QSLTIDKNLG IMVLFAALML ASAAMMLKKA YSKSTPATQV IEKKQPNIGL IVIEGAVVGV VTGILGAGGG FLIIPALVLI LGMPMKNAVG ASLFIIALKS LLGFVGDLQT GIQLEMPLLP LMLVATFIGM AVSTKVAGKL DGAALQKFFA FFTLVIAVFI MTKELL
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