Gene MADE_00086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00086 
Symbol 
ID6778963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp87520 
End bp88320 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content47% 
IMG OID642753516 
Producthypothetical protein 
Protein accessionYP_002124400 
Protein GI196154911 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATTC TTGGCTACAT CGCTGCTGTT CTTATGGGAA TGGTTTTAGG CGTAATAGGC 
GGAGGGGGTT CTATCCTCAC CGTGCCTATC CTCGTTTACT TAATGGGCGT TACGCCTGAT
ATAGCTACCG GCTATTCTTT GCTTATTGTG GGTGCCACAG CCGCATTCGG CGCGGTAAGG
TATTTCAAAG AAGGTCTAGT AGACGTTAAA GCGTCTATTT TATTTGCCGT GCCTTCCATC
ATTGCTGTTT ATCTTTCAAG GGCCTACCTA ATGCCCGCCA TTCCCGAAAC TATTTCTTTT
CAATCGCTAA CCATAGATAA GAACCTGGGC ATCATGGTGC TGTTTGCTGC ACTGATGTTG
GCCTCGGCTG CCATGATGTT GAAAAAGGCT TATAGCAAAT CGACGCCAGC AACACAGGTC
ATTGAGAAAA AACAACCCAA CATTGGGCTG ATAGTTATTG AAGGCGCAGT AGTGGGTGTT
GTTACCGGCA TACTCGGCGC AGGCGGTGGC TTTCTTATCA TACCCGCCTT GGTACTTATT
TTAGGCATGC CCATGAAAAA CGCGGTGGGC GCGTCTTTAT TCATTATCGC CTTAAAGTCG
TTGCTTGGCT TCGTAGGCGA CCTACAAACC GGAATTCAAT TGGAGATGCC TTTGCTGCCG
CTTATGTTGG TAGCCACGTT TATTGGGATG GCAGTCTCCA CGAAGGTAGC GGGAAAACTA
GATGGTGCAG CTTTGCAGAA GTTCTTTGCA TTTTTCACTC TAGTTATTGC CGTTTTTATC
ATGACCAAAG AGCTTCTTTA G
 
Protein sequence
MIILGYIAAV LMGMVLGVIG GGGSILTVPI LVYLMGVTPD IATGYSLLIV GATAAFGAVR 
YFKEGLVDVK ASILFAVPSI IAVYLSRAYL MPAIPETISF QSLTIDKNLG IMVLFAALML
ASAAMMLKKA YSKSTPATQV IEKKQPNIGL IVIEGAVVGV VTGILGAGGG FLIIPALVLI
LGMPMKNAVG ASLFIIALKS LLGFVGDLQT GIQLEMPLLP LMLVATFIGM AVSTKVAGKL
DGAALQKFFA FFTLVIAVFI MTKELL