| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00067 |
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| Symbol | tdh |
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| ID | 6779014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 71325 |
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| End bp | 72350 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642753496 |
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| Product | L-threonine 3-dehydrogenase |
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| Protein accession | YP_002124381 |
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| Protein GI | 196154892 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATCGC TAGTAAAAGC GAAGGCGGAA AAAGGCATTT GGCTGCAAGA CACGCCAAAG
CCGGAAGTCG GGCACAACGA CCTGCTGATT AAGATTCGCA AAACCGCTAT TTGCGGTACC
GATATGCATA TCTACAACTG GGATGAATGG TCACAAAACA CCATTCCCGT GCCTGTGGTC
GTCGGTCACG AATACGTAGG CGAAGTAGTG GGTATGGGGC AAGAAGTAAA AGGCTTCGAA
GTAGGTGACC GTGTGTCCGG TGAAGGTCAT ATTACCTGTG GTCATTGCCG AAACTGCCGT
GCTGGCCGCG TACATTTGTG CCGCAACACC GAAGGTGTGG GTGTAAACCG CCCGGGGGCC
TTTGCCGAAT ATTTAGTTAT TCCTGCCTTC AACGCGTTTA AAATTCCAGA CAATATCAGC
GACGACCTAG CGTCCATATT TGACCCATTT GGTAATGCTG TTCATACCGC GCTAAGTTTC
GACTTAGTAG GCGAAGACGT ACTTATCACA GGTGCAGGAC CTATCGGCAT TATGGCGGCT
GCGGTCGCCA AGCACGTTGG TGCGCGTCAT GTTGTGGTTA CCGATATCAA CCCTTATCGC
CTTGAGCTTG CTAAAAAAAT GGGTGCTACT CGCACTGTTG ATGTCAGTAA AGAAAACCTA
CAAGACGTTA TGGATGAGCT GGGCATGTCA GAAGGCTTTG ATGTAGGCCT AGAAATGTCG
GGCGTGCCGG TAGCCTTCAG AGACATGCTG AACAAAATGA ACCACGGCGG CAAAATAGCC
ATGCTAGGTA TACCGCCACA GGATGTGGCA GTCGACTGGA ACCAAGTTAT TTTCAAGGGC
TTGGTAATAA AAGGTATTTA CGGCCGTGAA ATGTTTGAAA CCTGGTACAA AATGGCGAGT
TTGCTGCAAA GCGGTTTAGA CCTGTCGCCT ATCATCACAC ATACCTTTTC TATTGATGAC
TTTCAGAAAG GGTTTGATAC CATGGGGTCA GGACACTCAG GTAAAGTTAT TCTGGACTGG
CAATAA
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| Protein sequence | MKSLVKAKAE KGIWLQDTPK PEVGHNDLLI KIRKTAICGT DMHIYNWDEW SQNTIPVPVV
VGHEYVGEVV GMGQEVKGFE VGDRVSGEGH ITCGHCRNCR AGRVHLCRNT EGVGVNRPGA
FAEYLVIPAF NAFKIPDNIS DDLASIFDPF GNAVHTALSF DLVGEDVLIT GAGPIGIMAA
AVAKHVGARH VVVTDINPYR LELAKKMGAT RTVDVSKENL QDVMDELGMS EGFDVGLEMS
GVPVAFRDML NKMNHGGKIA MLGIPPQDVA VDWNQVIFKG LVIKGIYGRE MFETWYKMAS
LLQSGLDLSP IITHTFSIDD FQKGFDTMGS GHSGKVILDW Q
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