| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00065 |
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| Symbol | |
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| ID | 6778724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 67529 |
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| End bp | 69973 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642753494 |
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| Product | GGDEF/EAL domain protein |
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| Protein accession | YP_002124379 |
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| Protein GI | 196154890 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTCC AGGTATCTTT TACCACCAAA ACCATCCTTA TTTTATTGGC GATGGTATTA
ACCGTTGCTA TTGTCATTTC GACAGTGCTG ATCCAAGAGT CCGAAGCTCG GGTGTTGCTC
GAGCAGCGGG AAAGCCAAAT CAGCAATCAG CGACGGGTTC AGCTTTTCGA AGATATTCTT
CACGGGCGTA TGATCACGCT TATTGATGTT ATTAGTCGTA AAAAAGGCAC CTATTCCAAT
AACCTAAACG AACTGCAGCA GTCGTTGAGT GATTTAAGCG AGTATTTAAC CCTCAACTTT
CAAGTAGAGT CGCTTTTATT ATTCGATGAG TTTGGCGTGG TAGGCACACC AAATCGTCCA
ATAGACAACA CAATTGAACG GCTTGTCGAT ACAACACGAG CAACGTTTGA AAGTCGCTCG
CTATTGGTTT GTGACAATGT ATGTACACAC TATATCTCCA TTCCTGTTAT GGCGGACAGC
GACACAATTC CTATCATTGT AGTTTCCACA TCAATGCGTG AGCTTTTGTA TTTGTTCAGC
CGCGCCACAG ATGTGCATAA AGTTGCCATT GTCCAAGCTA AAAAAATGCC GGCAGGGAAA
ACAAAACTTG CTGTAGCTAG CCAAGTATCT GCGGCAAATC GACAGTATCT GCAATCGCTT
TTTGATGTCT TGCCAGAGCA ATGGCGTATC GATGATTTAG TGATAAAAGG CTTAAATGTA
GTGCTTGATA ACCAGCAACT GCTTGTAAGC TTATTGCCCT TTGACCATGC CTCTGGCGAT
CATCCTTACT TGCTGATAGT GCAAGATGTA TCGGCTATGG TACGACAAAA CGAGCAATAT
CAATATGTGG TTATTTCAAG TGCCATTGGG TTATTCCTGC TGTTCTCGTC ACTGCTTTAC
GTATTTCTAA ATCAGTACCG AATCAGGTTA TTAAATGTAA GTGAACGCTT ACCAATGCTG
GCGGAGCATA AATTTAAAGA GTTCTATACG ATTGCAGCAA AACGCAGAAA ATCGCCTATT
TTTAGACTTA CTGATGAACT CGATGTCGTA GAAGAGGCGG CGAATAACCT AGCTCGTCAG
CTTGAAAGCT TTGACGGTCA AATGGCAATA AATACCGCGA AGCTTGAAAA GATGGCTATG
TTTGACGTGC TTACTGGCCT GCCCAATCGA AATATGCTGA CTTTTCAAAT TGAAAAGCAG
TTGGCCAGCT CTATCCGCGA TGACAGGTTA GTGGCGTTAA TGTTCATGGA CTTAGATGAC
TTCAAAAAAG TTAACGACAG CCACGGCCAC GATGTGGGCG ATAAATTATT AAAAGCGGCA
GCCATGCGTA TTTCTCGTCC CATTAGAGAT TCTGATATCG CGTCGCGTTT CGGCGGTGAT
GAGTTCGTTA TATTGCTATC AAACATAGAA AGTAAACAGC ACGTCGATAA AGTCGCACAA
AAAATTATCG ATGAATTCAT AGATCCAATC ATTGTGGATG GCGTGACATT TTATGTGTCT
ATCAGTATCG GTATTGCTAT CACTAGTCAC TCGCGTGCAA CACCGGTAGA ACTGTTACGT
CATGCAGATA TCGCCATGTA TGAAGCGAAA GCCAAAAAAG GCGCTGCGTT TAAGGTCTAC
GATGCCACAA TGAACTTAAA AGTGATGCAA AAAGTTGAGT TGGAGTCTGA GGCGCGCGAA
GCGTTGAGGG ATAACCAATT CAGCTTGGCT CTTCAGCCAC AAATCGAAAT GCACACTGGG
AAGCTGATAG GGTTTGAAGC GTTACTGCGT TGGTATCACC CTAAAAAAGG GCACATTTCA
CCAGCTCAGT TTATACCGCT GCTTGAAAAT ACGTCTTTTA TGCTAGAGCT AGACTATTGG
GTGATAGCAC GCTCTACTCG CATAGTTCGC GATTTTAAAA ACAGTGGTTA TCCCGATATT
AAGATTGCTA TTAATCTCTC AGCCGGGCAG TTTTTAGCCC CCACTTTGCC TGAGTTTTTA
CAACAGCAAA TCATTAAAAA CGATATAGCG CCCAACCAAG TTTGCCTAGA GCTTACCGAA
ACGGTGCTGG TGTCCGACAT TAAACGTGCA ACGAGCATCA TGAGAACCAT TCGAGAAATG
GGGTGTATGC TGGCCATTGA CGACTTCGGA ACCGGTTATT CCTCGCTTAG CTATTTAAAA
TCGCTACCGG CTGACTATAT TAAAATTGAT CGCTCGTTTG TTGCGAATAT TGCTAGCAGT
GCCGACGACA GGAACATTGT TCATTCCACC ATTTCCATGG TGTGCAACAT GGGAATGCAG
GTGGTAGCCG AAGGCATAGA GACCAGTGAG CAATACGAAC TGCTGTGTCA TTTCGACTGT
CATATCGGAC AAGGCTACCT TATAAGTAAG CCCATTTCAG AAGCCAATAT TTGGGACGTG
TTAAATGACA AAGTGGAATA TAACTTCTGG AAAGACTTCA CCTAG
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| Protein sequence | MKVQVSFTTK TILILLAMVL TVAIVISTVL IQESEARVLL EQRESQISNQ RRVQLFEDIL
HGRMITLIDV ISRKKGTYSN NLNELQQSLS DLSEYLTLNF QVESLLLFDE FGVVGTPNRP
IDNTIERLVD TTRATFESRS LLVCDNVCTH YISIPVMADS DTIPIIVVST SMRELLYLFS
RATDVHKVAI VQAKKMPAGK TKLAVASQVS AANRQYLQSL FDVLPEQWRI DDLVIKGLNV
VLDNQQLLVS LLPFDHASGD HPYLLIVQDV SAMVRQNEQY QYVVISSAIG LFLLFSSLLY
VFLNQYRIRL LNVSERLPML AEHKFKEFYT IAAKRRKSPI FRLTDELDVV EEAANNLARQ
LESFDGQMAI NTAKLEKMAM FDVLTGLPNR NMLTFQIEKQ LASSIRDDRL VALMFMDLDD
FKKVNDSHGH DVGDKLLKAA AMRISRPIRD SDIASRFGGD EFVILLSNIE SKQHVDKVAQ
KIIDEFIDPI IVDGVTFYVS ISIGIAITSH SRATPVELLR HADIAMYEAK AKKGAAFKVY
DATMNLKVMQ KVELESEARE ALRDNQFSLA LQPQIEMHTG KLIGFEALLR WYHPKKGHIS
PAQFIPLLEN TSFMLELDYW VIARSTRIVR DFKNSGYPDI KIAINLSAGQ FLAPTLPEFL
QQQIIKNDIA PNQVCLELTE TVLVSDIKRA TSIMRTIREM GCMLAIDDFG TGYSSLSYLK
SLPADYIKID RSFVANIASS ADDRNIVHST ISMVCNMGMQ VVAEGIETSE QYELLCHFDC
HIGQGYLISK PISEANIWDV LNDKVEYNFW KDFT
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