Gene MADE_00062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00062 
Symbol 
ID6775649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp64780 
End bp65784 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content49% 
IMG OID642753491 
Productputative ADP-heptose:LPS heptosyltransferase 
Protein accessionYP_002124376 
Protein GI196154887 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTAT CAGCCATAGG TGATGTGTGT CACGCCGTTG CCATGGTAAC TCGAATTCAA 
TCACAGTGGC GCGATGCTGA AATTACATGG GTAATCGGAA AAGTGGAGTA TCAGCTCGTT
AAGCTGATGC CAAACGTGCG GTTTATTATT TTCGATAAAT CACAGGGCAA AGCTGCTGTT
GAATCGCTAA AAGCGGCTGT GGCAGGTGAA ACCTTCGACG CGTTACTTAT GATGCAGGTG
GCGCTTCGGG CTAATATGGC CTCGCGCGTT ATTAAAGCAA AGCAGCGCAT TGGGTTTGAC
TGGTCGCGCA GTAAAGAGCT GCATTGGCTA TTTGCCAACA AACGGGTTGC TGCGACAAAG
CACGCACATG TGCTTGAAGG TTTCATGGAT TTTGCCGATG CACTGGGTGT ACCCAAATCT
GACACGTTAA CGTGGAATAT TCCTGTCACC CCTGAAGATG CGCGGTGGGC AGAGGAACAA
GCAAAGGCGC TTGGAAAATA TGTGGTTATT TCACCAGCGG CCAGTAAGGC GGAAAGAAAT
TGGTTACCGC AGCGATACGC CAGTATTGCT GACTATATCC AAGAGTCTGG CGTCAACGTG
ATACTATGCG GCGGCCCGGG TGAATTAGAT CGCAAAACCG CCGATGCGAT TAAAGCAGAG
GTCAAACATC CGGTGAAAGA CTTCACTGGG AAAACGTCAC TTCATCAGCT ACTCATGTTG
TTAAAGCATG CTCACTTGGT GATTGCGCCA GATACAGGGC CGGCCCACAT GGCAACCACG
GTAGGAACAC CGGTTATTGG GCTTTATGCA CACTCTAACC CACGGCGAAC AGGGCCTTAT
CACAACCTTG AAAGGGTGGT GTCAGTCTAC GATGAGTGTA TCGAAGTGCA AAAAGGAAAG
CCTTGGAAAG CCCTGCCATG GGGAACACGG GCCAAAGGTA GCGAGTTAAT GGAAAAAATA
TCTGTGGAGA TGGTAAAGCA AAAAGTTGAA CCATTTATCG CTTAA
 
Protein sequence
MRLSAIGDVC HAVAMVTRIQ SQWRDAEITW VIGKVEYQLV KLMPNVRFII FDKSQGKAAV 
ESLKAAVAGE TFDALLMMQV ALRANMASRV IKAKQRIGFD WSRSKELHWL FANKRVAATK
HAHVLEGFMD FADALGVPKS DTLTWNIPVT PEDARWAEEQ AKALGKYVVI SPAASKAERN
WLPQRYASIA DYIQESGVNV ILCGGPGELD RKTADAIKAE VKHPVKDFTG KTSLHQLLML
LKHAHLVIAP DTGPAHMATT VGTPVIGLYA HSNPRRTGPY HNLERVVSVY DECIEVQKGK
PWKALPWGTR AKGSELMEKI SVEMVKQKVE PFIA