Gene MADE_00060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00060 
Symbol 
ID6779169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp63961 
End bp64605 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content46% 
IMG OID642753489 
Product3-deoxy-D-manno-octulosonic-acid kinase 
Protein accessionYP_002124374 
Protein GI196154885 
COG category[T] Signal transduction mechanisms 
COG ID[COG3642] Mn2+-dependent serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAACC CCGAGTTTTG GCAACAGCAA AACAAAATAA CAGGTCAAGC GAAAGGACGT 
GGTACAACCA TTTTCATTGA GCATGAAAAC CAGCGCTGGG TTTTGCGCCA TTTCATGCGT
GGCGGCCTAG TTGGAAAGAT ACTTAGCGAC CAATATTTGT TTTTAGGTGT TGAACGTTCA
CGCCCATTCG AAGAGTTTAG GCTACTTGAA CACATGCAAT CGCAAGGTTT GCGCGTGCCT
GTGCCGGTTG CTGCACGTAT TCATCGCAGA GGCCTCATTT ATCGGGGCGA CCTTATTACC
CTAAACATTC CTGACAGCCA AGACCTACAC CATGTACTGT GTAACCAGCC TTTGTCTGAA
GAAGCGTGGC ACAAAGTAGG CCATGCACTT GCTGCTATGC ATAATTGCCA AGTTTATCAC
CACGATGCAA ACGTACGAAA TATCATGATT GATAGTGATA AAGAGATTTG GCTTATCGAT
TTTGACCGTT GTTCAAAGCG CCAAGGGGAT AGCTGGAAGC AAAGTAACCT TGACCGCTTA
TTGCGCTCGC TACACAAAGA GAAAGCGAAA AACCCCGTGT TTCATTGGGA AGAAAAGCAT
TGGGCTTGGT GCATGGACGG CTATCGAAAT GCAGTTTCTC GATAG
 
Protein sequence
MFNPEFWQQQ NKITGQAKGR GTTIFIEHEN QRWVLRHFMR GGLVGKILSD QYLFLGVERS 
RPFEEFRLLE HMQSQGLRVP VPVAARIHRR GLIYRGDLIT LNIPDSQDLH HVLCNQPLSE
EAWHKVGHAL AAMHNCQVYH HDANVRNIMI DSDKEIWLID FDRCSKRQGD SWKQSNLDRL
LRSLHKEKAK NPVFHWEEKH WAWCMDGYRN AVSR