Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00060 |
Symbol | |
ID | 6779169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 63961 |
End bp | 64605 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642753489 |
Product | 3-deoxy-D-manno-octulosonic-acid kinase |
Protein accession | YP_002124374 |
Protein GI | 196154885 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3642] Mn2+-dependent serine/threonine protein kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAACC CCGAGTTTTG GCAACAGCAA AACAAAATAA CAGGTCAAGC GAAAGGACGT GGTACAACCA TTTTCATTGA GCATGAAAAC CAGCGCTGGG TTTTGCGCCA TTTCATGCGT GGCGGCCTAG TTGGAAAGAT ACTTAGCGAC CAATATTTGT TTTTAGGTGT TGAACGTTCA CGCCCATTCG AAGAGTTTAG GCTACTTGAA CACATGCAAT CGCAAGGTTT GCGCGTGCCT GTGCCGGTTG CTGCACGTAT TCATCGCAGA GGCCTCATTT ATCGGGGCGA CCTTATTACC CTAAACATTC CTGACAGCCA AGACCTACAC CATGTACTGT GTAACCAGCC TTTGTCTGAA GAAGCGTGGC ACAAAGTAGG CCATGCACTT GCTGCTATGC ATAATTGCCA AGTTTATCAC CACGATGCAA ACGTACGAAA TATCATGATT GATAGTGATA AAGAGATTTG GCTTATCGAT TTTGACCGTT GTTCAAAGCG CCAAGGGGAT AGCTGGAAGC AAAGTAACCT TGACCGCTTA TTGCGCTCGC TACACAAAGA GAAAGCGAAA AACCCCGTGT TTCATTGGGA AGAAAAGCAT TGGGCTTGGT GCATGGACGG CTATCGAAAT GCAGTTTCTC GATAG
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Protein sequence | MFNPEFWQQQ NKITGQAKGR GTTIFIEHEN QRWVLRHFMR GGLVGKILSD QYLFLGVERS RPFEEFRLLE HMQSQGLRVP VPVAARIHRR GLIYRGDLIT LNIPDSQDLH HVLCNQPLSE EAWHKVGHAL AAMHNCQVYH HDANVRNIMI DSDKEIWLID FDRCSKRQGD SWKQSNLDRL LRSLHKEKAK NPVFHWEEKH WAWCMDGYRN AVSR
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