Gene MADE_00047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00047 
SymbolslmA 
ID6776752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp54169 
End bp54756 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content44% 
IMG OID642753476 
Productnucleoid occlusion protein 
Protein accessionYP_002124361 
Protein GI196154872 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGCTG TCAAAAAAAC CAATCGCAGA GCGCAAATTC TGCAAGCACT TGCTGGAATG 
TTAGAAACCA GCCCAGGTCA ACGTATCACT ACGGCTAAAT TAGCGGAAAA AGTTGGCGTG 
TCTGAAGCTG CGCTTTATCG CCATTTTCCC AGTAAGGCGC GAATGTTTGA AGGGCTTATC 
GAGTTCATCG AAGAAACGCT TTTCACGCGT ATTAATAAAA TAGTGAATGA AGAAAAAGAT 
TCACTAACAC GCTGCCAGCT TATACTGCAC CTAATTTTAG GCTTTGCGGA AAAGAACCCA 
GGCATAACCC GCATATTAAA TGGTGATGCG CTAATGGGTG AGCAAGACCG ATTACGTGCA 
CGCATTGCAA AACTGTTTGA GCGTTTAGAA ACCCAGCTTA AACAGGTGTT AAGAGAGCGC 
AAACTGCGCG AAGGGAAAAC CCTTTCAGCA GATGAAGCAA TTATTGCTAA TATGATGATT 
TGCTACACTG ACGGTCGCAT TAATGGCTTT ATTCGCAGTG GCTTTACTCG TAAGCCTACT 
GAACAGTTCA ACGAACAATG GGCTGCGTTT AAGCAGATGT TTGTTTAA
 
Protein sequence
MPAVKKTNRR AQILQALAGM LETSPGQRIT TAKLAEKVGV SEAALYRHFP SKARMFEGLI 
EFIEETLFTR INKIVNEEKD SLTRCQLILH LILGFAEKNP GITRILNGDA LMGEQDRLRA 
RIAKLFERLE TQLKQVLRER KLREGKTLSA DEAIIANMMI CYTDGRINGF IRSGFTRKPT 
EQFNEQWAAF KQMFV