| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_00031 |
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| Symbol | |
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| ID | 6779063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 32087 |
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| End bp | 32926 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 642753456 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_002124345 |
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| Protein GI | 196154856 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0702833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TCGCTGTATT TGGCAACCCT ATTGCACAGA GTTTATCACC AACCATCCAT
CAGATGTTTG CAGATCAGGT CGGAGAAAAG ATTTCTTATG AAAAGATACT TGCGCCTGAA
GATGGTTTTG TTGAAGCTGC CAAAGCGTTT TTAGCTCAAG AAGGCGCTGT AGGCTGCAAT
GTCACCATGC CTTTTAAGCT TGATGCCTTT AACTTAGCAA AGGTAGATGA TCAAGCAGCT
AAAGACGCAC AAGCTGTTAA TACACTAATG AATGGTGACA GAGGTGAGCT GTTAGGGTTC
AACACAGATG GTGTGGGGCT AGTCAATGAT TTACTAAATA GCGGCGTGAA AATTAAAGAT
AAACACGTGT TACTTATCGG AGCCGGCGGC GCAGCCCGTG GCGTCATTTC TCCGTTATTA
AAAGCGGGCG CTGCTACACT GACTATTGCG AATAGAACGA AAGCCAAAGC TGAAGAAGTG
GCAAGCGCTG CTTCAAACCC TAAAGTGGAC GTAGTGGCCC TTGAGGATAT CGCAACGATT
GCACCTCATA TTATTATCAA TTCAACAGCA GCTAGTTTAA GCAATGCGTT GCCGTGCAGT
TTGAATGACG GTGTTTTACA ACACTGTGAA GTGGTGTACG ACATGGTTTA TAAAAATTCA
CCCACGCGTT TTATGAGAGA TGCGGCTGAA CTAGGTGTTA AAACGCAAAT AGATGGGTTA
GGGATGCTGG TTGAGCAAGC GGCTGAAGCG TTCTATATAT GGACACAAAA GCGCCCAGAC
ACTTCTGATA TTGTTAAGCG AGTTCGTGAC ATTGTTGAGC AAAGTGAGAA GCGAAACTAG
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| Protein sequence | MKKFAVFGNP IAQSLSPTIH QMFADQVGEK ISYEKILAPE DGFVEAAKAF LAQEGAVGCN
VTMPFKLDAF NLAKVDDQAA KDAQAVNTLM NGDRGELLGF NTDGVGLVND LLNSGVKIKD
KHVLLIGAGG AARGVISPLL KAGAATLTIA NRTKAKAEEV ASAASNPKVD VVALEDIATI
APHIIINSTA ASLSNALPCS LNDGVLQHCE VVYDMVYKNS PTRFMRDAAE LGVKTQIDGL
GMLVEQAAEA FYIWTQKRPD TSDIVKRVRD IVEQSEKRN
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