Gene MADE_00019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00019 
SymboltrkA 
ID6776975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp21285 
End bp22664 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content48% 
IMG OID642753444 
Productpotassium transporter peripheral membrane component 
Protein accessionYP_002124333 
Protein GI196154844 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCA TCATTTTAGG GGCAGGCCAA GTAGGCGGTA CGCTTGCTGA AAACTTAGTT 
GGTGAAAATA ACGAAATTAC CGTTATAGAT TCAGACCCCA CCATTCTACG GGCACTTCAA
GACCGTCTAG ATCTACAAGT AGTCACGGGT GTTGGTTCTC ACCCTGACGT ACTGCGTAAA
GCAGGGGCAG AAGACGCTGA CATGCTTATC GCCGTTACTA ACAGTGACGA AAGTAACATG
TTGGCGTGTC AGGTGGCCTA CAGCTTATTT AAAACCCCCA CAAAAATAGC CCGCGTACGC
TCTGAACAAT ACATTATTTA TCAAGAGCAG CTGTATAAGC AGCAAGATAT TCCTGTCGAC
CATATCATTG CCCCCGAACA GCTAGTGACC AAAGCAATTA AGCGCCTTAT CGATTATCCC
GGCGCGCTAC AGGTAGTAGA GTTTGCTGAA GGCAAGGCAA GTTTGGTCGC GGTTAAAGCC
TATTATGGTG GCCTGTTGGT AGGTCATGCG CTATCTGCCC TGAAAGACCA TATGCCTAAC
GTTGAGACCC GCGTGGCCGC CATCTATCGC CGAGGCCGCC CTATTCGACC ATTGGGCACG
ACGGTTATAG AAGCGGATGA CGAAGTCTTC TTTATTGCAG CGACCAAACA TATCCGCGCG
GTAATGAGTG AACTACAAAA ATTAGAGTCT AGCTATAAGC GCGTCATGAT AGCGGGCGGT
GGTTTAATTG GTGCAGGACT GGCTAAGCAG CTCGAGCACA ACCACAATGT AAAACTTATC
GAATACAGCC CTGAACGGGC TAAATACCTT TCTGCTAACT TAGATAAAAC CATTGTTTTC
AGTGGCGATG CCTCTGACCC TGAGCTACTC AGCGAGGAAA ATATCGAACA GGTAGATGCG
TTTATCGCGG TTACCAATGA CGATGAAGCG AATATTATGT CGGCCATGCT GGCCAAGCGT
ATGGGTGCAC AGAAAGCCAT GGTGCTTATC CAACGCAGCG CTTACGTGGA TTTAGTTCAA
GGTGGCGAAA TCGACATTGC GTTTTCACCC CAGCAAGCCA CTATATCGGC CCTGCTTACT
CACGTACGTC GTGGTGACAT TGTGAATGTT TACTCGTTGC GCAGGGGCGC TGCTGAAGCC
ATTGAGGCCA TCGCGCACGG CGATGAAAAC ACCTCTAAAG TGGTGGGCAG ACAAATTGGT
GATATTAAAC TGCCACCGGG TACTACCATT GGCGCTATCG TTCGCGATGA ACAGGTTATT
ATTGCTCATA GCGATACCAA GATAGAAGCT AACGATCACG TTATTCTGTT TTTGGTAGAT
AAGAAGTATA TCAACGACGT GGAAAAGCTC TTCCAACCGA GCGCGTTTTT CTTTGGCTGA
 
Protein sequence
MKIIILGAGQ VGGTLAENLV GENNEITVID SDPTILRALQ DRLDLQVVTG VGSHPDVLRK 
AGAEDADMLI AVTNSDESNM LACQVAYSLF KTPTKIARVR SEQYIIYQEQ LYKQQDIPVD
HIIAPEQLVT KAIKRLIDYP GALQVVEFAE GKASLVAVKA YYGGLLVGHA LSALKDHMPN
VETRVAAIYR RGRPIRPLGT TVIEADDEVF FIAATKHIRA VMSELQKLES SYKRVMIAGG
GLIGAGLAKQ LEHNHNVKLI EYSPERAKYL SANLDKTIVF SGDASDPELL SEENIEQVDA
FIAVTNDDEA NIMSAMLAKR MGAQKAMVLI QRSAYVDLVQ GGEIDIAFSP QQATISALLT
HVRRGDIVNV YSLRRGAAEA IEAIAHGDEN TSKVVGRQIG DIKLPPGTTI GAIVRDEQVI
IAHSDTKIEA NDHVILFLVD KKYINDVEKL FQPSAFFFG