Gene MADE_00015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00015 
SymbolengB 
ID6776104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp14610 
End bp15248 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content44% 
IMG OID642753440 
Productribosome biogenesis GTP-binding protein YsxC 
Protein accessionYP_002124329 
Protein GI196154840 
COG category[R] General function prediction only 
COG ID[COG0218] Predicted GTPase 
TIGRFAM ID[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTATT ACACCAAAGC AAAGTTCTTT ACGAGTGCAC CTGATATTCG TCACTTGAAG 
AACGATACCG GAATTGAAGT AGCGTTTGCC GGCCGCTCAA ATGCGGGAAA ATCAAGCGCA 
CTAAATACGT TAACGCGCCA ACGAAATTTG GCAAGAACCA GTAAAACCCC TGGCCGTACA 
CAGTTAATCA ACGTGTTTGA ATTAGAAGAA GAACTGCGTT TAGTTGACTT ACCTGGCTAT 
GGGTTTGCAA AAGTCCCTGT CGCGATGAAA AAGAAGTGGC AGGCGTCGTT GGGCGAATAC 
CTACAAAAGC GTAAGTCGCT TAAAGGGTTA GTCGTATTAA TGGACATCCG CCATCCTTTT 
AAAGACCTAG ACCAAGACTT GATTCACTGG GCTGTAGAGT CGAATATTCC AGTGTTAGCG 
CTATTAACTA AAGCCGACAA ATTAAAAAGT GGTAAGCGTA AGGCGCAGCT GCTTATGGCA 
CAAGAAGCAG CACTTGCGTT TATGGGGGAT GTCACGGTTC AGACTTTCTC TTCATTAAAT 
AAACACGGTT TACCAGAACT TGAACGTATT CTAGATGGAT GGTTCGGGCT AGACAAAAAA 
AGTGATGAAG AGGGGGCTGT TGTCGAGGGA CAAGATTAG
 
Protein sequence
MSYYTKAKFF TSAPDIRHLK NDTGIEVAFA GRSNAGKSSA LNTLTRQRNL ARTSKTPGRT 
QLINVFELEE ELRLVDLPGY GFAKVPVAMK KKWQASLGEY LQKRKSLKGL VVLMDIRHPF 
KDLDQDLIHW AVESNIPVLA LLTKADKLKS GKRKAQLLMA QEAALAFMGD VTVQTFSSLN 
KHGLPELERI LDGWFGLDKK SDEEGAVVEG QD