Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00006 |
Symbol | |
ID | 6775824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 4716 |
End bp | 7136 |
Gene Length | 2421 bp |
Protein Length | 806 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642753431 |
Product | DNA gyrase subunit B |
Protein accession | YP_002124320 |
Protein GI | 196154831 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00261354 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGCAG AGAACAACTA CGACTCGTCC AGTATTAAAG TACTTAAAGG ATTAGATGCC GTAAGAAAGC GTCCTGGTAT GTATATCGGT GATACTGATG ATGGTACCGG GTTACACCAC ATGGTTTTCG AGGTGGTCGA TAACTCTATC GATGAAGCAC TTGCTGGACA TTGTTCTGAG ATTGTTGTGC AGATTCACAG CGATGGCTCA GTATCTGTGT CTGACGATGG TCGCGGTATT CCTACAGAGT TGCACCCTGA AGAGGGCGTA TCTGCAGCTG AAGTTATCAT GACGGTGCTT CACGCAGGCG GTAAGTTTGA TGATAACTCA TATAAAGTAT CAGGTGGTCT TCACGGCGTA GGTGTTTCAG TAGTGAACGC ACTTTCAAGC CGATTGAAGC TTCGTATTCG CCGTGGTGGA AAGGCTCATG AACAAGAATA CCAACACGGT GTTCCACAAG CGCCACTAGC GGTTACTGGT GATACTGATA AAACCGGAAC TATGATTCGC TTCTGGCCAA GTTCTGATAC CTTTACCGAT ACGCTTTATC ATTATGATAT TTTAGCTAAG CGTCTTCGTG AGTTGTCGTT TTTGAACTCT GGCGTTTCTA TTCGTTTAAA AGACGAACGT GATGGTAAAG AAGACCACTT CATGTATGAA GGCGGTATCA AGGCATTCGT TGAATATTTG AATCAAAAGA AAACTGCTGT TCATCAAAAA GTATTCCACT TTAGCAGTGA GCAGGAGGAT GGCATTGCAG TAGAAGTCGC AATGCAGTGG AACGATAGCT TCCAAGAAAA CGTGTTTTGC TTCACTAACA ACATTCCACA ACGAGACGGC GGAACGCATT TAGCGGGCTT CCGTGGTGCG CTTACACGTA CATTAAATAA CTATATGGAA AAGGAAGGGC TGAATAAAAA AGCCAAGACC AATGCCAGTG GTGACGATGC TCGTGAAGGG TTAACTGCCG TTATTTCCGT AAAAGTACCT GACCCGAAAT TCAGCTCACA GACAAAAGAT AAGTTGGTTT CTTCTGAGGT ACGCCCTGCT GTTGAATCGG CAATGAACGA AAAGCTTGCT GAGTTTCTAT TAGAAAACCC AGCGGAAAGT AAAATCATTG CGGGTAAAAT TATCGATGCT GCTCGCGCGC GTGAAGCAGC CCGTAAAGCT CGTGAAATGA CACGTCGTAA GGGCGCACTA GACTTAGCTG GCCTGCCAGG CAAGCTTGCT GATTGTCAGG AAAAAGATCC TGCACTAAGC GAACTGTACA TAGTGGAGGG TGACTCGGCG GGCGGTTCAG CTAAGCAGGG TCGTAATCGT AAGAACCAAG CTATTTTGCC GCTTAAAGGC AAAATTCTTA ACGTAGAGAA AGCACGTTTC GACAAGATGC TTTCTTCACA AGAAGTTGCA ACGCTTATCA CGGCATTAGG CTGTGGTATT GGCCGTGACG AATATGACCC AGAGAAACTA CGCTATCACA GCATCATCAT TATGACCGAT GCTGACGTTG ATGGCTCGCA TATCCGTACA CTTCTACTTA CGTTCTTCTA CCGTCAAATG CCAGAGATTA TTGAACGTGG CTACGTCTAT ATCGCACAGC CACCGCTTTA TAAAGTGAAG AAAGGTAAGC AAGAGCAGTA TCTAAAAGAC GACGATGCTT TGACTAATTA CCTAACAGGT ATTGCAATTG ATGGCGCATC TTTGCACACC AGTGATGAGG ACCCAGGCAT CAGTGGTGTA GGGCTAGAAA ACCTTGTTAA ACAATATCAG TCAGTAGAAA AAATGATCGC GCGTATGAAG CGCAAGATGC CTTCAGCAAT TCTTTACCGT ATGCTGTACA CGCCTACGCT AAACCTTGAA GACCTGAAAG ATGAATCAGC GCTAGAGCAT GTAGCAAAAC ACTTCGTAGA ACAGCTTACA GAGCGCGAGA ACGATGGTGC TACATACCGT TATGAAATTC GTACTGATGC TGAGCTGAGC GAATACTACA TCACGATCAT CATGCGTATG CACGGTATCG ATTATGAGTA TATTATCGAC CATGAATTCA TTGAGTCGTC TGAGTACCAG CGTCTGAAAG AGCTTAACTT AGCTATTAAT GACATGATGA GTGTAGATGC TTACATCAAG CGGGGTGAAC GTAAACAGCC AGTAGAATCT TTTAAAGAAG CGTTAGACTG GTTAATGAAT GAAGCGAAAC GTGGTCAATA CATTCAGCGC TATAAAGGGT TAGGCGAGAT GAACCCGGAA CAGCTTTGGG AAACGACCAT GGATCCAGAA GGTCGCCGTA TGCTTCAAGT TACCATTGAA GATGCCATTG GTTGTGACCA GTTGTTTACA ACGTTAATGG GCGACCAAGT AGAACCGCGC CGAGAATTTA TCGAAGCGAA TGCACTGAAG GTAGAAAACC TAGACGTGTA G
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Protein sequence | MSAENNYDSS SIKVLKGLDA VRKRPGMYIG DTDDGTGLHH MVFEVVDNSI DEALAGHCSE IVVQIHSDGS VSVSDDGRGI PTELHPEEGV SAAEVIMTVL HAGGKFDDNS YKVSGGLHGV GVSVVNALSS RLKLRIRRGG KAHEQEYQHG VPQAPLAVTG DTDKTGTMIR FWPSSDTFTD TLYHYDILAK RLRELSFLNS GVSIRLKDER DGKEDHFMYE GGIKAFVEYL NQKKTAVHQK VFHFSSEQED GIAVEVAMQW NDSFQENVFC FTNNIPQRDG GTHLAGFRGA LTRTLNNYME KEGLNKKAKT NASGDDAREG LTAVISVKVP DPKFSSQTKD KLVSSEVRPA VESAMNEKLA EFLLENPAES KIIAGKIIDA ARAREAARKA REMTRRKGAL DLAGLPGKLA DCQEKDPALS ELYIVEGDSA GGSAKQGRNR KNQAILPLKG KILNVEKARF DKMLSSQEVA TLITALGCGI GRDEYDPEKL RYHSIIIMTD ADVDGSHIRT LLLTFFYRQM PEIIERGYVY IAQPPLYKVK KGKQEQYLKD DDALTNYLTG IAIDGASLHT SDEDPGISGV GLENLVKQYQ SVEKMIARMK RKMPSAILYR MLYTPTLNLE DLKDESALEH VAKHFVEQLT ERENDGATYR YEIRTDAELS EYYITIIMRM HGIDYEYIID HEFIESSEYQ RLKELNLAIN DMMSVDAYIK RGERKQPVES FKEALDWLMN EAKRGQYIQR YKGLGEMNPE QLWETTMDPE GRRMLQVTIE DAIGCDQLFT TLMGDQVEPR REFIEANALK VENLDV
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