| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1580 |
|---|
| Symbol | |
|---|
| ID | 6744412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | + |
|---|
| Start bp | 1496096 |
|---|
| End bp | 1497625 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642751400 |
|---|
| Product | protein of unknown function DUF1703 |
|---|
| Protein accession | YP_002122239 |
|---|
| Protein GI | 195953949 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00740643 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTTT TACCAATAGG TATACAAACA TTCGAGAAGA TAAGAAATAG CAATTATTAC
TATGTAGATA AAACAATATT TGTTAAAAAA TTAGAAAATG GTGGGTATTA CTTTCTATCT
CGCCCCAGAA GATTTGGCAA ATCTCTTTTT CTTGACACAC TAAAAGAAGC GTTTTCTGGT
AACAAAGAAT TATTTAAAGG GCTTTATCTA TATGATAATT GGGATTGGGA TAAGAAATAT
CCTATTATAA AAATAAGCTT TGCAAGTGGA AATATAAGAA CTTCAGATAT TTTATTGGAT
CTAATGACAT CTCAAGTAAA TAGGATATCA GAAAAAGAAC AGATAAACTT AAAAGAAAAG
CGTCCAAGCC AAATGTTTTT AGAACTCATC CAAAAACTAT ACGAAAAATA CAATCAAAAA
GTAGTAGTAC TTATAGACGA ATACGATAAA CCGATATTAG ATGCGATAGA GAATATAGAA
GTAGCCAGGG AAAACAGAGA AATATTGAAA GATTTTTATT CGGTGTTAAA AGATGCTGAT
CCTTATCTAA AACTTGTTTT TCTTACAGGG GTATCGAGGT TTTCAAAAGT AACAATCTTT
AGTGGATTAA ATCAGCTTCA GGATATCACT TTAAATGAAG AGTTTTCTAC AGTGTGCGGT
TATACCCAAT CTGAGCTTGA AAGTGTATTT GAAGACAGAT TAAAGGATTT TGATAAAGAA
AAGATAAAAC AGTGGTATAA CGGCTATAGT TGGCTTGGAG AGAGTGTTTA CAATCCTTTT
GATATACTGC TTTTGTTCTC AGAAAAAAGG TTTAGAGCCT TTTGGTTTGA AACAGGGACA
CCTACATTTC TTATTAAGAT GTTTATGAAA AACAGATACT ACATACCAGA GCTTGAGAAC
CTTGAAGTAG GAGACGAGAT TCTATCAAAC CTTGATGTGG ATAATATAAG GATAGAAAAT
CTTTTGTTTC AATCTGGTTA TCTTACAATA AAAGATTTTA AAGAAAAATA CGGAATATAC
ACATTGTCCT ATCCAAACTT AGAAGTGAGA AAAAGCTTCA ACAGTTATTT TCTAACCTAT
ACAATAGAAG ATATCTCAGC AAAATATAAA ACTGATATAG GTCTAATAGA GGCTTTTGAG
AATAAACAAG TAGAAAAACT AAAAGACATC TTACATAGAT TTTTTGCAAG TATACCCCAT
GATTGGTACA GGAAAAACGA TATAGACTCC TATGAGGGAT TTTACGCATC TATCGTATAT
GCGCTTTTTA ACGGAGCAGG GCTAAATGTA ATAGCAGAAG ACAATACAAA TAAAGGCCAG
ATAGATCTTA GTGTCTTTAA CCAAGACAGC GTTTATATCA TAGAGTTTAA GGTAGTAGAA
GACAAGGAAG AGGGCGTTGC TTTAAAACAG ATAAAAGATA AAAGGTATTA TGAAAAGTAT
ATGGACAAAT ATAATGATAT ATACCTAATA GGGGTAGAGT TTAGTAAGAA AGATAAGAAC
ATTGTGGGCT TTGAGTGGGA GAAGTACTGA
|
|---|
| Protein sequence | MKLLPIGIQT FEKIRNSNYY YVDKTIFVKK LENGGYYFLS RPRRFGKSLF LDTLKEAFSG
NKELFKGLYL YDNWDWDKKY PIIKISFASG NIRTSDILLD LMTSQVNRIS EKEQINLKEK
RPSQMFLELI QKLYEKYNQK VVVLIDEYDK PILDAIENIE VARENREILK DFYSVLKDAD
PYLKLVFLTG VSRFSKVTIF SGLNQLQDIT LNEEFSTVCG YTQSELESVF EDRLKDFDKE
KIKQWYNGYS WLGESVYNPF DILLLFSEKR FRAFWFETGT PTFLIKMFMK NRYYIPELEN
LEVGDEILSN LDVDNIRIEN LLFQSGYLTI KDFKEKYGIY TLSYPNLEVR KSFNSYFLTY
TIEDISAKYK TDIGLIEAFE NKQVEKLKDI LHRFFASIPH DWYRKNDIDS YEGFYASIVY
ALFNGAGLNV IAEDNTNKGQ IDLSVFNQDS VYIIEFKVVE DKEEGVALKQ IKDKRYYEKY
MDKYNDIYLI GVEFSKKDKN IVGFEWEKY
|
|---|
| |