| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1568 |
|---|
| Symbol | |
|---|
| ID | 6744399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 1481544 |
|---|
| End bp | 1483820 |
|---|
| Gene Length | 2277 bp |
|---|
| Protein Length | 758 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642751388 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_002122228 |
|---|
| Protein GI | 195953938 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAG TGTTCAAAAT AAGCGGGATG ACCTGTGTAA ACTGCCAAAG GACTATACAG
ATAGGTCTTA AAAAGACAAA AGGTGTAGAG GATGTTGATG TGTCTTTGGT TTTAGAAAGG
GCTATAGTGA GCTTTGATGA AAATATTTTA TCAAAAGAAG ATGTCGTTAA AAAAATAAAA
GAGCTTGGAT ACGAGGCCCA AGTAGTAGAA GAGTCTGGTG TTTTAAACCT ATACCTTGAT
AAAGTAGATT GCTCCACTGA CTCTTGTGCT TTACTTACAA AAGAGGATTT AGAATCCTTA
AATGGTGTAA AAAAGGCAGT TTTAGACAAT ATAAAACAAA CCCTTTACAT AGAATACGAT
AAAGATATTA TTTCCTCTGA AGATATAATG GCTTTCATAA GATCAAAAGG GTATGAAGCC
TCTATTTTAG AACTTGACAG ATCAAAAGAG ATAGTTCTAA AAATAGCTTT TGGCATAGCA
TCGGGTATTC TTATAATGGC TCTTAACTAC AGCTCTATAG CCTACAAAGA TTATATAGAG
ATGGTTTTAG CAATAGCTGT TCAGTTTTAC ACTGCCAAAG ATTTTTACAA AGGGGCTATC
GCTTCTTTAA AAGCCAAAAC TGGTAATATG GATCTTTTGG TGGCTTTAGG AAGCTTTGTA
TCTATAGTGT ATAGTTCTTT TGTGGTATTT GGGCTTTTAA AAGGAAACAC GTTTTTTGAA
ACACCCACTT TTTTGGTATC TTTTGTTTTA ATAGGAAAAC TCATAGAGTA TAGGCTAAAG
AAAAAAGCAA GCGCTTATCT TAAAAATCTT ACATCTTTAA ATCTAAGAAG TGCAAGGGTT
TTAAAAGGTA CTGAAGAAGT GGTTGTAGAC TCTTACTCTT TAAAAGAGGG GGATATTGTT
TTATTTAAAG CTGGAGACAG GGTATCTTTG GATATAATTG TAAAAGAAGG AAGCGCTTAT
ATCGATACAT CTTTTATAAA CGGGGAGTTT GAGCCTGTTT TTGTAAAAGA AGGAGACAAC
GTAATATCTG GTTCTTTGGT AAAAAGCGGT TATATAAAGG GGGTTGTGGT AAATATAGCT
GAGAAATCTT TTATAAATGA GCTTGTAAGG GCTTCAAACC TAAGCCTTGA AAAAAAACCA
AACATTCAAA GAATAGCCGA CACGGTCTCT TCTTACTTTG TGCAGGCTAT TATCTTAATA
TCTTCTTTTG TGTTTGTGGT ATGGAAAATA ATAGGCGTAC CCACAGAAGA GGCTTTAAAC
TATGCTGTAT CTACACTTGT GATATCGTGT CCTTGTGCTA TGGGTATAGC GGTGCCTATA
TCTGTTATGG TGGCAGTTTC TATGGCTTTT AAGAATGGTA TTTTGATAAA AAACGCCGCT
TCTTTAGAAA CCCTTTACAA AGCCGATACT TTTGTGTTGG ATAAAACTGG TACTTTAACA
GAAGGTACAT TTAAAGTTGT AAAAGAGGAT ATAAAAGAGG ATAAGGAAAA AGTATGCTCT
TTGATAAAAC ATGCCGAAAG GTTTTCAAAC CATCCGATAG GAAAAGCCCT TTATGAACAC
TGTAAAGATT ACAATATGGA TATAAATTTA ACGTGTGAGG AGATAGAAGG TTTTGGTATA
AAGTGTGAAG ATATTTATAT AACAGATGTT TCTTTTTGGG ATAAAGATAT AAACAAAAAA
GCTATAGGTA TAGGCACAAA AGAGAGTCTC ATGGGCATTT TTTATCTTGA AGATGCTATA
AGCCCATACG CTAAAGATTT TATTAAAAGC TTAAAACAAA GAAAAAAGAA AATCATACTT
TGTTCTGGAG ACACCGAAAA CAACGTTAAA TATATAGCCG ATACTCTTGG TATAGAGTAC
TACTTTGCTT CTATGAGTCC TACTGATAAA TCAAACCTTA TTAAACGATT AAAAGATGAA
AATCATATAG TCTGTATGGT GGGAGATGGT ATAAACGATG CAAAGGCTAT GGCGCTTTCT
GATATTGGTA TAGCTGTTTC AAAAGCTTTA GATGCTGCCA AAGTAAGTAC AGATATTGTA
GTGTCAAGTG GTGGCCTTGA AAAAATAATA TATCTTTTAG ACCTTACGGA TAAATTTATG
AAAAATGTAA AACAAAATCT ATTTTGGGCT TTTGGTTACA ACGCTGTCAT GATACCCTTT
GCCGCTGGTA TTTTTTCTAA ATACGGCATT TACATAGAAC CTCAGTTTGC TGGGCTTTTG
ATGGGGTTTT CATCGGTGAG CGTAGTGCTA AACGCTATGA GGCTTTCAAA AGCTTAA
|
|---|
| Protein sequence | MRKVFKISGM TCVNCQRTIQ IGLKKTKGVE DVDVSLVLER AIVSFDENIL SKEDVVKKIK
ELGYEAQVVE ESGVLNLYLD KVDCSTDSCA LLTKEDLESL NGVKKAVLDN IKQTLYIEYD
KDIISSEDIM AFIRSKGYEA SILELDRSKE IVLKIAFGIA SGILIMALNY SSIAYKDYIE
MVLAIAVQFY TAKDFYKGAI ASLKAKTGNM DLLVALGSFV SIVYSSFVVF GLLKGNTFFE
TPTFLVSFVL IGKLIEYRLK KKASAYLKNL TSLNLRSARV LKGTEEVVVD SYSLKEGDIV
LFKAGDRVSL DIIVKEGSAY IDTSFINGEF EPVFVKEGDN VISGSLVKSG YIKGVVVNIA
EKSFINELVR ASNLSLEKKP NIQRIADTVS SYFVQAIILI SSFVFVVWKI IGVPTEEALN
YAVSTLVISC PCAMGIAVPI SVMVAVSMAF KNGILIKNAA SLETLYKADT FVLDKTGTLT
EGTFKVVKED IKEDKEKVCS LIKHAERFSN HPIGKALYEH CKDYNMDINL TCEEIEGFGI
KCEDIYITDV SFWDKDINKK AIGIGTKESL MGIFYLEDAI SPYAKDFIKS LKQRKKKIIL
CSGDTENNVK YIADTLGIEY YFASMSPTDK SNLIKRLKDE NHIVCMVGDG INDAKAMALS
DIGIAVSKAL DAAKVSTDIV VSSGGLEKII YLLDLTDKFM KNVKQNLFWA FGYNAVMIPF
AAGIFSKYGI YIEPQFAGLL MGFSSVSVVL NAMRLSKA
|
|---|
| |