| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1531 |
|---|
| Symbol | |
|---|
| ID | 6744362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 1444832 |
|---|
| End bp | 1446439 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642751352 |
|---|
| Product | DNA primase |
|---|
| Protein accession | YP_002122192 |
|---|
| Protein GI | 195953902 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0358] DNA primase (bacterial type) |
|---|
| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAACA AAGCTTATAT GTTGGAAAAG AACAAAGCTG GCAACATATC AATAGAAGAT
GCCATAAAAA AGATAGATAT AGTAAAAGAA ATATCTTCCT ACATAGAACT AAAAAGAAGC
GGCAGCAACT ATTTGGGAAA ATGCCCTTTT CACGATGACT CAACACCTTC TTTGTCTGTA
TCAGAGCAAA AGCAAATTTG GAAGTGCTTT GGGTGTGGTA AAGGTGGGGA TGTGGTAAAA
TTTGTATCTT TGCATGAAAA TATCTCCTAT ATGGAAGCTC TTTCAAAATT AGCCATTAAA
TACAACCTAC CCATCAATAT AAAAAGTGAA GAAAAAAACC ACAAGATATA CGAAGTCATG
AGTTTAGTAT CTAACTTTTA CCACGAAGAA CTGACAAAAA GCCCAAAGGC TATGCAATAC
CTTCAAAAAA GAGAGATAAA CCCAAAAACG GTAGAAATCT ATGAGATAGG CTATTCACCG
AACCATTACA AGGTGTTGGA ATTTTTGCAA AATACATCAG AACATTATCT CGAACTTTAC
AAAAGCACAC AAAACCTACA CAAATCTTCA AATAGCATAA GGGATATATT TGAAGGAAGG
CTTGTAATAC CTATAAAAAA TGCATCTTCA AACGTTGTGG GATTTGGCGG TAGGATTTTA
TACGAAGATA AATCTGCCAT AAAGTATTTG AACTCGCCAG ATTCTTTTAT ATTTAAAAAA
TCACAACTTC TATTTGGTAT AGACATAGCC CTTCCTTACA TAAAAGAAAA GGAAGAGGTA
ATACTGGTAG AGGGCTATTT TGACGTTATA AGACTTTATC AGATAGGCGT AAGAAACGTG
GTAGCTCCCC TTGGAACGGC ATTTACCGAA GAGCATGCAA AGACCATATC AAAATACGCC
AAGACAGCGT ATATAATGTT TGACAACGAC AATGCAGGAA AAAACGCAAG TTTAAGAGCC
GCCAAATATC TAATAGCCAA AGGTATAAAG GCCTTTTACG TAGAGATAAA AGACGCTAAA
GACCCAGACG AATTTGGTAT GAAGTTTGGA AAAGACGGCG TTTTGGAGCT TTTAAAAACA
TCAAAAAACA TAATAGATTT AAACATAGAG TCAAAAAACA TAGATACAGC CTTAGAGTTG
GTTTCTTATC TCAAAGAACC AGAAGACATA TTCCAATATA GTCAAAAACT CTTAGCGGTA
GGATTGCCAA AACATATAAT AGATCAATAC GTTGGTAAAA AAAGTTTTGT AGAAAATAAA
GAGCAAGGTG ATATCTCTTA CGAAAAAATA CCTATGAAAG ATAGGATACT CTTAAAAGCC
TTAAAAGAGT GTGATATAGT AGACATAAAC CCTTTAGACA TAGACTGGCT TGACAAAAAC
TCCATAATAA TAGCAGAAAA AATAAAGTAT CAACAAGAAC TAAGCGACGA AGAGTTAAAA
TTGCTTGAAT CTGTTGATTA CCTTACAAAA GATGCTCTTG AAAAATACCT ATTAAAGACT
GCCAAAGAAC AAAACGCCGT TACCAAAGAA GAACTTATGA ACATCAAAAA TACACTTAGT
AGAAAATCTT ATATAAAGAA GTATTATTTT TCTCATGGTA AAAGTTAA
|
|---|
| Protein sequence | MLNKAYMLEK NKAGNISIED AIKKIDIVKE ISSYIELKRS GSNYLGKCPF HDDSTPSLSV
SEQKQIWKCF GCGKGGDVVK FVSLHENISY MEALSKLAIK YNLPINIKSE EKNHKIYEVM
SLVSNFYHEE LTKSPKAMQY LQKREINPKT VEIYEIGYSP NHYKVLEFLQ NTSEHYLELY
KSTQNLHKSS NSIRDIFEGR LVIPIKNASS NVVGFGGRIL YEDKSAIKYL NSPDSFIFKK
SQLLFGIDIA LPYIKEKEEV ILVEGYFDVI RLYQIGVRNV VAPLGTAFTE EHAKTISKYA
KTAYIMFDND NAGKNASLRA AKYLIAKGIK AFYVEIKDAK DPDEFGMKFG KDGVLELLKT
SKNIIDLNIE SKNIDTALEL VSYLKEPEDI FQYSQKLLAV GLPKHIIDQY VGKKSFVENK
EQGDISYEKI PMKDRILLKA LKECDIVDIN PLDIDWLDKN SIIIAEKIKY QQELSDEELK
LLESVDYLTK DALEKYLLKT AKEQNAVTKE ELMNIKNTLS RKSYIKKYYF SHGKS
|
|---|
| |