| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1527 |
|---|
| Symbol | |
|---|
| ID | 6744358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 1440455 |
|---|
| End bp | 1441903 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642751348 |
|---|
| Product | type II secretion system protein E |
|---|
| Protein accession | YP_002122188 |
|---|
| Protein GI | 195953898 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.155656 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGGCT ATGTGGAAAA TAGCACGTTA GATTTAGCCA AACACTTGAG GTTTATGCCC
ATAAAAGAAG ACCAATACAC TCTAACGATA GAGGTATCTA GCAATCAAGA TTTGGCTTTT
GTAAAAAATA TCTTATATTT TTATTTAGAC AAAAAGATAA AAACTGCGGT TTTAAACGAA
GAAGAGTTCT TAGAACATTG GAACAACTTC TTATCCCAGT CCTATCAAAC TTTAGAAGAT
CAAGATGTGA AGCTGGAGTT TGAAACTATA GACATTGCAA AAGATGAGCT TGAAAGCCCC
GCTATTATAT TTGTAAACAA CATCTTATTA AAAGCCATAA AAACAGGAGC TTCTGATATA
CATATAGAGC CCTACGAGAA AAACGTTTTG GTGAGAATGA GGATAGATGG CAAGCTGGTG
GTAGTGGAGG AGCTTACCAA CGGCTTTTAT CAAAGTGTAC TTTCCCGTAT AAAGGTTATA
GCAAATATGA ACGTAGCCGA AAAAAGATTG CCTCAAGATG CAAGATTTAG AATAAAGATT
TCAAAAAAAG AGATAGATAT AAGGGTTTCT ACGATACCTT CTTTGTTTGG GGAAAGGGTA
GTGCTTAGAA TATTGGATCA ATCAAATACG CCTCTTGATT TGGAAGAAAT TGGGCTTTCA
AAAGAAGCTT ATGAGGATAT ACTGGACATA CTTTCAAGAC CATACGGCAT AATACTTGTC
ACAGGACCCA CAGGAAGTGG TAAATCCACT AGTTTATACG CTTTTTTAAA GAGATTAAAA
AGCCCATCAA AAAATATAAT AACCATAGAA GACCCAGTGG AATATCAAGT AGAAGGCATA
TCACAAATTC AAGTAAATCC GAAAGTTGGT CTTACATTCG CATCTGGGCT TAGGTCTATA
TTAAGGCAAG ACCCGGATAT TATTATGATA GGAGAAATAA GGGACAGAGA AACCGCTGAA
ATAGCTATCC AAGCGGCTCT TACTGGACAT TTGGTACTTT CTACCCTTCA TACCCAAAAC
GCTTTATCAA GCGTTACGAG ACTTTTTGAT ATAGGGATAG AACCTTTTCT AATAGCTTCT
TCCATAGAAG GACTTATAGC CCAAAGGCTT GTAAGAAAAA TATGTCCTTA CTGTAAAACT
TCTTACAAAC CTTCTTACGT AGAGATCAAG GAGTTAGGTT TAAAAGAAGG AGATTATACA
TTTTACAAGG GGCTTGGTTG CGAACACTGT ATGCAGTCTG GCTATAAAGG GCGTATAGGA
CTTTTTGAAG TGATAAAAGC AGATGATAGA CTAAAGAGTC TAATATCTCA AAATCCCTCA
TGGGAGTATA TTAAAAGCCA TATACAATAC AAAAGTCTGT TGGATGATGG CATAGAAAAA
ATATTAAATG GTATCACATC CACAGAGGAA GTGCTTCAAG TGTGCAAGAT TGAGGCTCCT
AACTGTTAG
|
|---|
| Protein sequence | MQGYVENSTL DLAKHLRFMP IKEDQYTLTI EVSSNQDLAF VKNILYFYLD KKIKTAVLNE
EEFLEHWNNF LSQSYQTLED QDVKLEFETI DIAKDELESP AIIFVNNILL KAIKTGASDI
HIEPYEKNVL VRMRIDGKLV VVEELTNGFY QSVLSRIKVI ANMNVAEKRL PQDARFRIKI
SKKEIDIRVS TIPSLFGERV VLRILDQSNT PLDLEEIGLS KEAYEDILDI LSRPYGIILV
TGPTGSGKST SLYAFLKRLK SPSKNIITIE DPVEYQVEGI SQIQVNPKVG LTFASGLRSI
LRQDPDIIMI GEIRDRETAE IAIQAALTGH LVLSTLHTQN ALSSVTRLFD IGIEPFLIAS
SIEGLIAQRL VRKICPYCKT SYKPSYVEIK ELGLKEGDYT FYKGLGCEHC MQSGYKGRIG
LFEVIKADDR LKSLISQNPS WEYIKSHIQY KSLLDDGIEK ILNGITSTEE VLQVCKIEAP
NC
|
|---|
| |