| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1526 |
|---|
| Symbol | |
|---|
| ID | 6744357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 1438651 |
|---|
| End bp | 1440324 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642751347 |
|---|
| Product | transposase, IS605 OrfB family |
|---|
| Protein accession | YP_002122187 |
|---|
| Protein GI | 195953897 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.780615 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA ATAGCAAACA ATCTCTAGCT CAAAATACCG AGTTAAGAAC CTTTTCTATT
AGAATAAAGT CTGATAAATT AGAAAAGAAA CTAAAGAATA TCTTATTCGC ATACAAGCAC
TTTGAAAATA TACTGCTAAT ACTTATCAAC CAAAACTACA ATCTATATAA AGAAGATAAA
GATACAAACG ACTTTAATTT GCTAACTTCT CCACAACTTA TGAGAAATGC TTTGTATGAG
TACAACTCTA AGCACTTAAC ACAGGTAGAG TATCTCAAAA ACAAATACAA AGACAATCAA
CTTTGGCAAG CATTGAAAGA AACTGCCAAG AAATTAAAAT CACATAACTT ACTTCATATC
ATAAACAGAG TAAAAGCAAA CTTTAAAACT TATTTTACTA ACTTAGAGTT ATGCAAACAA
AATCCAAGTT TATTTCAAGG AATGCCTAAG CCTCCTAAAC CAAAGAAGCT TTCTAAATTA
ACAAACTATT CCGTAGAATT GGATAAATAC TGTTCTTTAT CTTTTGCACA TTTAGAAAAG
AAAAATTTAG TAGGTATTAA TTTGTCTAAT AGCATAGTTT ATATACATAT AAATAAAGAG
CAGGTTAAAA AGCTAACAGA TATAAACAAG TTATACTCAG CAAGAGTTAT ATACGATAAT
GGAGATTTGT ATCTACAAAT TAGTTATTTG AAAGAACTTA AGAAAACACA AACAAAGCAA
CTTAAATACG CCAGCATAGA TATAGGGATA AACAATCTAA TGGCAGTGTT TATAGACGAT
GAAAATACTC CGTCATTAAT AGTAGACGGC AAGCCTTTTA AACATTACAA TGCAAAGTTT
AATAGACTTG TAGCTAAGCT TAATGAATCA AAATCTAAAG AGGTATTAGA ATGGGGTGTA
TCAAAAACAG GAACAAAATA TCCTGTTAAA TATACAGAGA AAGGTAAGAG AATTGGTAAA
TTTATTTCGT TCTTATACTC AAAAAGAAAT AGGTTTTTTA CAGATCAATT TCATAAAATG
GCTAAGCGTG TAGTTGAGTA TTTACACCTA AATGGAGTAT CTGAACTTTT TGAACTTTTT
ATATCTAAAA ACTTAGCACA GCTAAAGAGC AATGGAGAGT GTGAACTAAG TAAAGCTGTA
AAACAGAACC TCATTCAAAT ACCATTTATA AAGCTAATCA GATACATAGA GCAAAAAGCC
CAAGAGTATG GTTTGCATTA TATAGACGAG AGATACACAT CTAAGACAAG TTGTATAAGT
GATGATATAA AGAGTATCCA AGTGTGCTCC AAGCATTTCT TAGAGCTAAG GGGTGCTTCT
GCCTGTTTAT CAGCATCGAA ACGCGTTGAT AACGCTCTAG ATAGTCCTCA CTTGACTAAT
GCTTTCAAAG GAAAGCGTGT TAAGAGAGGT TTATTCTTGG ATACTGTTAT AAACAAAGTA
TTCAATGCTG ATATTAACGC TGCCGTAAAC CATATCAAAA TAGGTACTGG TAAATGTTTT
GTTTGGTTAA AAGACAAACT ATTTAAGCTT TGTAATCCCA TTAAAATCAA AAGCGACTAC
GAATTTTGTG AGCTCTTAAA GAGTTTGCAA AATAGTGTGT CGGGTAAGTC TGTGTTTTAT
AACACGGAGG CGCCGCAATC TAACAGGTTG GTAGAAAATG TCAGCTTTTG TTAG
|
|---|
| Protein sequence | MKKNSKQSLA QNTELRTFSI RIKSDKLEKK LKNILFAYKH FENILLILIN QNYNLYKEDK
DTNDFNLLTS PQLMRNALYE YNSKHLTQVE YLKNKYKDNQ LWQALKETAK KLKSHNLLHI
INRVKANFKT YFTNLELCKQ NPSLFQGMPK PPKPKKLSKL TNYSVELDKY CSLSFAHLEK
KNLVGINLSN SIVYIHINKE QVKKLTDINK LYSARVIYDN GDLYLQISYL KELKKTQTKQ
LKYASIDIGI NNLMAVFIDD ENTPSLIVDG KPFKHYNAKF NRLVAKLNES KSKEVLEWGV
SKTGTKYPVK YTEKGKRIGK FISFLYSKRN RFFTDQFHKM AKRVVEYLHL NGVSELFELF
ISKNLAQLKS NGECELSKAV KQNLIQIPFI KLIRYIEQKA QEYGLHYIDE RYTSKTSCIS
DDIKSIQVCS KHFLELRGAS ACLSASKRVD NALDSPHLTN AFKGKRVKRG LFLDTVINKV
FNADINAAVN HIKIGTGKCF VWLKDKLFKL CNPIKIKSDY EFCELLKSLQ NSVSGKSVFY
NTEAPQSNRL VENVSFC
|
|---|
| |