| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1510 |
|---|
| Symbol | |
|---|
| ID | 6744341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 1423510 |
|---|
| End bp | 1424712 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642751331 |
|---|
| Product | Ornithine decarboxylase |
|---|
| Protein accession | YP_002122171 |
|---|
| Protein GI | 195953881 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0019] Diaminopimelate decarboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000015857 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGAAA AAGTTTTGGA AGCTGAAGAG GTGCCGGATG TATATCCTTT GCAGTATAAG
TTTGCGAAGC AGTATTTTGA TAGCATAGTA TTAAGAAAAC CCTTTATATT GGATGTTCTT
AAAAACGTAA AAACCCCGAC TCTAGTCATA AACTTAGACA GAATAAAAGA GAGGTTTATA
GAACTACAAG AGGCTTTAAA AGAAGCAAAG ATATATTATG CGGTAAAAGC AAACGATCAT
CAAGAAATAT TGGCTTTGCT AAATGACCTT GGCAGTGGTT ATGAAGTGGC TTCTTCCTGG
GAACTGGAAA AAGTCTTAAG ACTTGGAGTA GATGGTTCAA GAATTATATC TAGCAACCCG
GTAAAACCAT TAGATTTTAT AGATTACGCT TATAAATCTG GTATTAAAGC TTTTAGCATA
GATTCATACA AAGAAATAGA TAAGTTAAAA AAGATAGCTC CAAGATCAAG AGTATACATA
AGGCTAATAG TACCAAACGA AGGAAGCGAT TGGCCTCTTA CCAACAAATT TGGCGTTGAT
GTAGATACCG CTTTAGATAT TCTTGAGTAT GCAAAATACC AAGGATTTGT ACCTTATGGT
ATAACATTTC ATGTAGGTTC CCAGTGCAAC AACCTAAGAA ATTGGTTTAT AGGTATAAAA
AAAGCTTGGG AGCTTTGGGA AAAAGCCATA TACAAAGATA TAAAACTTAC AATGCTAAAT
TTAGGGGGTG GTATCCCCGT AAACTATCAA TACGAATCCC TTAGTATAAG AGATATTGGT
TCTTACATAG AGGCGCTTTT GCAAAAGTAT TTCCTTATAA AGCCTATGGA AGTACAAATA
GAACCAGGAA GAGGACTTGT AGGAGATGCT GGAGTGTTGG TTAGCTCTGT GATAGGCAAA
ACCACAAAAT ATATAAACGG TGAAGAATCT TACTGGATTT ACTTAGATAC TGGGGTATTT
AACGGGCTTG CTGAAGTTTT AGGGGGCATA AGCTATCCTA TGTATGCTGA GCAAAAAGGC
GAGATAAAAC CATACACCAT AGCTGGGGTT AGTTGCGACA GCATGGATAT AATATCAAAT
TTCACATATC TTCCAGAGGT GGACATAGGC GATAGAGTGT ATATAATGGC AACGGGTGCT
TACACTACAG TTTACGCTGC CAATTTCAAC GGCTTTGGCA TACCGGAAAC TGTTTTTGTA
TAA
|
|---|
| Protein sequence | MPEKVLEAEE VPDVYPLQYK FAKQYFDSIV LRKPFILDVL KNVKTPTLVI NLDRIKERFI
ELQEALKEAK IYYAVKANDH QEILALLNDL GSGYEVASSW ELEKVLRLGV DGSRIISSNP
VKPLDFIDYA YKSGIKAFSI DSYKEIDKLK KIAPRSRVYI RLIVPNEGSD WPLTNKFGVD
VDTALDILEY AKYQGFVPYG ITFHVGSQCN NLRNWFIGIK KAWELWEKAI YKDIKLTMLN
LGGGIPVNYQ YESLSIRDIG SYIEALLQKY FLIKPMEVQI EPGRGLVGDA GVLVSSVIGK
TTKYINGEES YWIYLDTGVF NGLAEVLGGI SYPMYAEQKG EIKPYTIAGV SCDSMDIISN
FTYLPEVDIG DRVYIMATGA YTTVYAANFN GFGIPETVFV
|
|---|
| |