Gene HY04AAS1_1506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHY04AAS1_1506 
Symbol 
ID6744337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHydrogenobaculum sp. Y04AAS1 
KingdomBacteria 
Replicon accessionNC_011126 
Strand
Start bp1421723 
End bp1422286 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content41% 
IMG OID642751327 
Product3-octaprenyl-4-hydroxybenzoate carboxy-lyase 
Protein accessionYP_002122167 
Protein GI195953877 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase 
TIGRFAM ID[TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.115298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAT CCATTGCCCT TCTTATCACC GGTGCCAGTG GAAGCATTTA CGCTGTTAGG 
ACTTTTGAAG TGCTAAAAGA GCACTACGAT CTACATGTGG TGATGTCAAA AACCGCCAAG
TACGTAATGG GTTATGAAAC AGGAGTTGGT GAGGAGTTTT TTAAAAAAGA AGCCCATGTT
TACGATTATA CAGATTTTGC AGCTCCTATA TCAAGCGGGT CTTTTTTATG CAAGTTTAAA
GGGGTTTTGG TGGTGCCTTG TTCTATGGGG ACTTTGGGAG CTGTGGCAAG CGGTGTTGCC
CAAAATCTCA TTCACAGAGT ATGCGATACA GCCCTAAAAG AGAGAGTACC TCTTGTTATG
CTTGTAAGAG AGATGCCTTA CAACAGTATA CACCTTGAGA ACATGCTAAA ACTAACAAAC
GCCGGTGCCA TCATAATGAG CGCAAGCCCT GGTTTTTATC ATAAGCCAAA AACCTTAGAA
GAAAGTATAG ACTTTGTAGT AGGAAAAGTT TTAGATACCC TAAGAATAGA TCACAACATC
TACAAAAGGT GGAAATCCTC ATGA
 
Protein sequence
MKESIALLIT GASGSIYAVR TFEVLKEHYD LHVVMSKTAK YVMGYETGVG EEFFKKEAHV 
YDYTDFAAPI SSGSFLCKFK GVLVVPCSMG TLGAVASGVA QNLIHRVCDT ALKERVPLVM
LVREMPYNSI HLENMLKLTN AGAIIMSASP GFYHKPKTLE ESIDFVVGKV LDTLRIDHNI
YKRWKSS