| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1481 |
|---|
| Symbol | |
|---|
| ID | 6744311 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | + |
|---|
| Start bp | 1396928 |
|---|
| End bp | 1398319 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642751302 |
|---|
| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| Protein accession | YP_002122143 |
|---|
| Protein GI | 195953853 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTACAA TGAATTTAGA CTGCAAGAAG TATAATATTA CAGACAACTC TAAAGAGGTA
GATAAAAATA CGGTATTTTT TGCTATAAGA GGAGTTTCAA AAGACGGTCA TGATTTTATA
GAAGAAGCCA TTGAAAAAGG AGCTCCTTAC GTTGTAGCAG AAAAACCTTT TAAGGATTTT
AAAAATATAA TAGTAGTAGA AGATTCTAAA AAAGCTTTTG GAGAGTGTGT AAAAGCTCAT
TTTGACAACC CAGATGAACA TCTGAAGGTC ATAGGTGTCA CAGGGACCAA CGGCAAAACA
AGCACCACAC ATATAATACA CGCTATTTTG TCTCAAAAAT ATAAAGGTGG TATCATTGGT
ACCATGTATT ATAAATTGGG AAATGAGGTT ATAGAGGCCC CAAACACGAC CCCAGGTGTG
AAAACGTGGT TTAGCCTTTT ATCAAAAGCC AAAGAAAAAG GGCTTGATTT TGTGGCGGCA
GAAGTATCTT CTCACGCTTT GGATCAACTC AGGGTTTATC CTACAAAGTT TTTTGCCACT
GTCTTTACAA ATCTTACCCA AGATCATCTT GATTATCATA AGACCATGGA AAACTATTTC
AACGCCAAAA GAAGGCTTTT TAAAGATTAT GAGTATGAGG TTTGTGTTTT AAATATAGAC
GATGATTACG GTAGCATGCT TTATGAGGAG TTTAAAGACA AAGCTATAAC TTATGGGTAT
TCGGAAAACG CCCATCTAAA GATAGATTAT TTTGATCAAG AAAACAAGGT TTTTGGCTTT
TACTATAAAA ATAAACATTA TGAGATTAAG ACAAACCTAA AAGGGGATTT TCAAGCTTAC
AACATGGGAG CAAGTATACT TCTTGGCTTT TATATGGGGT TTGATATAGA GGAGATTCAA
AGAGGTATTC TTTCTTTAAG CTCAATACCA GGAAGGTTTG AAACGATAGA GTTAAACGGT
GTTAAGGTGG TAATAGATTA TGCTCATACA CCAGATGCCC TTGAAAAGCT TTTAAAAACC
GCAAAAGCAA TAACCAAAAA CCGTCTTATA TGTGTCTTTG GTGCAGGTGG AAACCGTGAT
AAAACCAAAA GACCAAAGAT GGGCAAAATA GCTTCAGAAC TTTCTGACAT ATCAATAATA
ACCTCCGATA ATCCAAGGTT TGAAGAGTCG ATGGATATTA TCAAAGATAT ACTTGAGGGT
ATAGACCCAT CTAAAGGGCC TATGGTGGAA GAGGACCGCA AAAAAGCCAT AGCTTTGGCT
CTTGATATAG CCCTTGATGG TGATGTGGTG GTAATAGCTG GTAAAGGACA TGAGGATTAC
CAGGAGATAA AAGGTGTGAA ATATCATTTT AGTGATAAAG AAGAGGTGCT AAAGTATAAA
AATAACACTT AG
|
|---|
| Protein sequence | MFTMNLDCKK YNITDNSKEV DKNTVFFAIR GVSKDGHDFI EEAIEKGAPY VVAEKPFKDF
KNIIVVEDSK KAFGECVKAH FDNPDEHLKV IGVTGTNGKT STTHIIHAIL SQKYKGGIIG
TMYYKLGNEV IEAPNTTPGV KTWFSLLSKA KEKGLDFVAA EVSSHALDQL RVYPTKFFAT
VFTNLTQDHL DYHKTMENYF NAKRRLFKDY EYEVCVLNID DDYGSMLYEE FKDKAITYGY
SENAHLKIDY FDQENKVFGF YYKNKHYEIK TNLKGDFQAY NMGASILLGF YMGFDIEEIQ
RGILSLSSIP GRFETIELNG VKVVIDYAHT PDALEKLLKT AKAITKNRLI CVFGAGGNRD
KTKRPKMGKI ASELSDISII TSDNPRFEES MDIIKDILEG IDPSKGPMVE EDRKKAIALA
LDIALDGDVV VIAGKGHEDY QEIKGVKYHF SDKEEVLKYK NNT
|
|---|
| |