| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1437 |
|---|
| Symbol | |
|---|
| ID | 6744263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | + |
|---|
| Start bp | 1357142 |
|---|
| End bp | 1358041 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 642751255 |
|---|
| Product | pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit |
|---|
| Protein accession | YP_002122100 |
|---|
| Protein GI | 195953810 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
|---|
| TIGRFAM ID | [TIGR02177] 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00297797 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAAG AGTTGGAGCT TCAACCAGCG GATTATAGAA GCGATATAGA ACCCACATGG
TGTCCAGGAT GTGGGGATTT TGGTGTTATA AGCGCCATTA CAAAAGCTCT TTCAGAGCTT
AAAATAAGAC CAGAAAACGT AGTATCTGTA TCTGGTATAG GATGCTCCTC TAGAGCACCT
TTGTTTTTGA AAAACTACAG TATGCATGTA CTTCATGGTA GAGCTATACC CACCGCTATA
GGTGTAAAGC TTGCAAACCC AAATCTTACT GTCTTAGTGG AAGCTGGAGA CGGGGATTTA
TTTTCTATAG GTTCTGGCCA TAACCCACAT GCGGCTAGAA GAAACATAGA TATCACGGTA
CTTTGTATGG ACAACCAAGT GTATGGTCTT ACTAAAAATC AAATATCACC CACTTCAAGA
GAAGGACTTT ACGGCTCTTT AACGCCTTAT GGTTCTATAG ATAAGCCAAT AAATCCTATA
TCCTACATGC TTACTTTTGG CGCTACCTTT GTGGCTCAAA CTTACGCTGG TAACCTCAAG
CACATGAGCG ATGTTATCAA AAAGGCTATA TCCCATAGAG GTTTTAGTTT TGTAAACATC
ATATCTCCAT GTCCTACATA CAACAAGGTA GACACTTTCA AATACTACAA GGACAAGACT
ATAGATATAA ACGAACAAGG CCACAATGAT ATCCAAAATC TCCAAAAGGC TTTAGAGCTT
GCCACAAGGG ACTTAGAGCA CTATTACAAC GAATCTGCTA AAGTGCCAAT AGGTATTTTC
TACAAAAAAG AAGAACCCAC TTATCACGAT AGAGAAAATG AGATAAAAGC AAGATACAAA
GCTTCAAAGG ATATAAACCC TCAGATTTTC ATAGATCAGT GTAAAGTGCT GCCTGTATGA
|
|---|
| Protein sequence | MEQELELQPA DYRSDIEPTW CPGCGDFGVI SAITKALSEL KIRPENVVSV SGIGCSSRAP
LFLKNYSMHV LHGRAIPTAI GVKLANPNLT VLVEAGDGDL FSIGSGHNPH AARRNIDITV
LCMDNQVYGL TKNQISPTSR EGLYGSLTPY GSIDKPINPI SYMLTFGATF VAQTYAGNLK
HMSDVIKKAI SHRGFSFVNI ISPCPTYNKV DTFKYYKDKT IDINEQGHND IQNLQKALEL
ATRDLEHYYN ESAKVPIGIF YKKEEPTYHD RENEIKARYK ASKDINPQIF IDQCKVLPV
|
|---|
| |