Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_1421 |
Symbol | |
ID | 6744246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 1336611 |
End bp | 1337474 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642751238 |
Product | ROK family protein |
Protein accession | YP_002122084 |
Protein GI | 195953794 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 78 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACTCT CTTTAGATGT AGGGGCTACT CATATAAAAT CTGGGATAGT AGAAGATGGT AGTATAAAAA ATAGGCTTGA TTTTGAAACA CCAAAAGATT TTGAAGAGTT TTTGAGGCTT TTAGAAAAAA TAATATCTCA TTATAAGGAT ATAGATACAC TTTCTATAGC AATAGCTGGT CAAGTGGATA TGAAAAAAGG TATTTTAAAA CACGCACCAA ACTTAGGCTG GAAAGATATA AATTTTGTAG AGCTTGTGCA AAATAGATTA AAAAAAAGGA CTATCCTAAT AAACGACGTT AGGGCTATCA CGTACGGAGA ATACATATAC GGCGGGTTAA AAGATGTAGA AAACGGAGCT TGTGTTTTTG TAGGTACAGG TATAGGTGGT GGGCTTATCA TAGATAAAGA GCTTAGGTTT GGCTGTGATT CAAACTTAGG TGAGATAGGG CATATGAAAC TAAAACCAAA TGGGCTAAAA TGCACCTGCG GTAAAAGGGG CTGTTTTGAA GCTTACGCTG GGGGGCTTTC TTTGGAGAGA TATTTAAAAA AATTAGGTTA TAATAAAAGC TTAAAAGATT TGGTTAGTGA AAAAGACTCA AAAGTTGCAA AAAAGGTTTT TGATAGGTTT GTTTTGTATA TGTCTTATGG GCTTGCTAGT TTGATAAATA TGTTAAATCC ATGTAAGATA GTGCTTGGGG GTGGTGTTAT GATGGGTTTT AGCTTTTTGT TTGAAGAGAT AAAAAATAAA GCTATTTCAC TATCTATAGA CCCAAGCGTT GAGCATATAG ATATCACACT TTCAGAGCTT GGAAACGATG CTGGGATACT GGGAGCTCAC GCTTTTGCTA TGAAGCATAT ATGA
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Protein sequence | MILSLDVGAT HIKSGIVEDG SIKNRLDFET PKDFEEFLRL LEKIISHYKD IDTLSIAIAG QVDMKKGILK HAPNLGWKDI NFVELVQNRL KKRTILINDV RAITYGEYIY GGLKDVENGA CVFVGTGIGG GLIIDKELRF GCDSNLGEIG HMKLKPNGLK CTCGKRGCFE AYAGGLSLER YLKKLGYNKS LKDLVSEKDS KVAKKVFDRF VLYMSYGLAS LINMLNPCKI VLGGGVMMGF SFLFEEIKNK AISLSIDPSV EHIDITLSEL GNDAGILGAH AFAMKHI
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