Gene HY04AAS1_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHY04AAS1_1397 
Symbol 
ID6744222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHydrogenobaculum sp. Y04AAS1 
KingdomBacteria 
Replicon accessionNC_011126 
Strand- 
Start bp1310857 
End bp1311276 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content32% 
IMG OID642751214 
Productputative transcriptional regulator, CopG family 
Protein accessionYP_002122060 
Protein GI195953770 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID[TIGR02793] nickel-responsive transcriptional regulator NikR 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.640554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAGA TGGATAAAGC AAAGGTTGAA AGGATATGTA TAACAATACC AAAAGAGCTT 
GTAGATTTTA TAGACAAAAA AGTAGAACAG TCTTATGCAT CAAGGTCTGA GTTTATAAGA 
GATTTGATAA GAGAGGCCAT TGTAGAAGAT GAATGGGAAG ATGAAAACAA TGAGCTTATA 
GGGGTTTTAG TGATAATATA TGATCATCAT AAAAGAGAGC TTACACAAAA GTTGCTCGAT 
ATACAGCACA ACCATTATAT AAACATTCTA TGTACTACGC ATATACATAT AGATCATAAC 
AATTGCTTAG AAACCATAAT GATAAAAGGT CCTAGTCAAA CGATAGTAGA AACTGTAAAC 
ATCATAGCAG GTCTCAACGG CGTTAAATTT GCTAAGTTGG TAAAAGCTTC AAAACTATAA
 
Protein sequence
MRKMDKAKVE RICITIPKEL VDFIDKKVEQ SYASRSEFIR DLIREAIVED EWEDENNELI 
GVLVIIYDHH KRELTQKLLD IQHNHYINIL CTTHIHIDHN NCLETIMIKG PSQTIVETVN 
IIAGLNGVKF AKLVKASKL