| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1389 |
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| Symbol | |
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| ID | 6744214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 1302811 |
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| End bp | 1303935 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 642751206 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002122052 |
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| Protein GI | 195953762 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000158934 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACTC TAAAAAAGTA TGTGCTATAT TTCCTGATAC CAATGGTTGT TATCATACTT
TGGCTTGGTG GGTTTTTTGA GCATAAAATC TCTCCCGGTG AAAAGCCCCT AAAACCAAAG
GTTATTTCAA ATGTAAACGT TATCACAGTA TCTTCTTCCA CACCTTTAGA AGAAGAGTTT
GAGGGTGTAG TGAGTGCCAA AAACCACGCT GCTATCTCCA CAAGGCTTAT GAGCAAAGTT
TTGGGGGTTT ATGTAAAAGA TGGTGATTGT GTGAAAAGAG GACAGCTTTT GGTAAAACTT
GATACAAAAG ATATATCAAG TATGGTAGCT CAAGCAAATT ACGGAGCCAA GCAAGCCCAA
GACCAGATGA AAGCAGCCGA AGCTAACTTA CAAGCTATCT CAAAAACCTA TCAAAGATTT
CAAAAGCTTA TAAAAACAGG AGCAGTAACA GAGCAAGAGT ACGATGAGGT AAAAGCCAAG
TACGAAGCGG CAAAAGCTAT GGTAGAACAA GCCAAAAACG CTATAATGGC TGCAAAAGCT
GGAGCATCCG CTGCCGGGGC AAACTTAGCC TATGCCAATA TAACAGCTCC GTTTTCAGGG
TGCATATATA TGAAAAATGT AAATACAGGA GATATAGCAG CCCCTGGTAT GCCACTTATG
ATGATAGATA AACCACCATA CAGAGTAGAT GTGGCACTAC CAGAAAAGTA TATAAACAAA
ATAACCCCAG GACAAACGTT GAAAGTATAT ATAGGTGGCA TAGATAAAAC AGTAGAAGGC
ACTGTAAAAG AGGTATCCAA AGCTTTAAAT CCTATGTCTC ATACGTTCGA TGTAAAAATA
GATATACCAA ACCAAGATGG TATCACAAGC GGGCTTTACG CAAAAGTTTA TATTCCTAAA
AGCCAGGAAA CTGTCGTTAC TATACCAAAG GATGCACTGT TTAAATGGGA CGATATAGAC
GCGGTATGGC TAGTAGACAA AAACAACATA ACCCATATGC AGTTTGTAAA GCTTGGTCAA
AAGGTAGGCG ATAGCTACGT AGTACTATCT GGTTTAAAAC CAGGCGATAG AATAGTGGAA
GGAAACGTAT ACAACGTTTG CGATAAATGC AAGATAGGAG AGTAA
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| Protein sequence | MNTLKKYVLY FLIPMVVIIL WLGGFFEHKI SPGEKPLKPK VISNVNVITV SSSTPLEEEF
EGVVSAKNHA AISTRLMSKV LGVYVKDGDC VKRGQLLVKL DTKDISSMVA QANYGAKQAQ
DQMKAAEANL QAISKTYQRF QKLIKTGAVT EQEYDEVKAK YEAAKAMVEQ AKNAIMAAKA
GASAAGANLA YANITAPFSG CIYMKNVNTG DIAAPGMPLM MIDKPPYRVD VALPEKYINK
ITPGQTLKVY IGGIDKTVEG TVKEVSKALN PMSHTFDVKI DIPNQDGITS GLYAKVYIPK
SQETVVTIPK DALFKWDDID AVWLVDKNNI THMQFVKLGQ KVGDSYVVLS GLKPGDRIVE
GNVYNVCDKC KIGE
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