| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1362 |
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| Symbol | |
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| ID | 6744186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 1276815 |
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| End bp | 1278155 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642751178 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
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| Protein accession | YP_002122025 |
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| Protein GI | 195953735 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.922831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTCTT TAGAAGTTTC TAAGAGCTTA GGTTTGATAC ATGAGGGGAA ACCGTTTTTT
ATAAAAGATG TATTTTTTGA TTCAAGAGAG TCTATAAAAG ATGCTTTGTT TGTAGCTATA
AAAGGAGAAA AAACCGATGG CCATCTTTAT ATAAAAAACC TTCTTGACGA AAATATAGCG
GGTTTTTTGG TAAGAGAAGA CTTTGACTGT AAAGAGATAC TAGCAAAAGG TAAATCTTGT
TTAAAAGCCA AAGATACGAT AAAAGCTTTG CAGGACATAG CCTCTTTAAA AAGGAATAGC
CTTAAAGCGA ATGTTGTAGC GATAGCTGGT TCTGCTGGTA AGACCACTAC AAAAGAGCTT
ATAGCCCATG TGTTGCCTGG CAAAGTGCAT AAAACTTACA AAAATTTTAA TTCTCAGATA
GGTCTTCCAA AGGTGGTTAT AACAGCTGAT GATGATATAG GTTATCTTGT GTTGGAGATG
GGAGCCACCG CTTTAGAAGA TGTTAAAAAG CTTACAAACA TCGCAAAACA ACATATAGGG
GTTATATCTT CTATAGGAGA AGAGCATCTT GAGAGTTTTG GTTCTATTGA AAACGTAGTA
AAAGGAAACT TTGAAGTGTT TGACTCTCCA AATCTTTTGT CTGGGGTCTA CCCTAAGGCG
TTTCATAGCT TTTATAAAAA AGAATATGGG CTTAGTTTTT GTAGGTTTAG AGACGATGCT
GATATAAGGG TAAAAAATGT CTATATAGAC GAAGAAGGTA CACATTTTGA GATAATGGGA
ATTAGGCTTA CTATACCAGT TTTGAGCATA GGTATAGCAG AGAGTGCAGC CGCAGCGGTT
GGTGTTCTTG CATCTTTTGG TATAGATTGG AAGGAGCTAA AAGACAGGTT TGAGAGTTTT
AAAGGTGTGC AAGGAAGGAT GCAACTTATA AAAAAAGGAC CTTTTAGAAT AATAGACGAT
ACTTACAACG CAAATCCTGT TTCTGTAAAA AATGCCATTC TTACTATAGA TAGTTTTAAA
GATTTTAATA AGATAATAGT TTTGGGAGAT ATGCTTGAGA TGGGAGAGTA TTCAAAGGCT
CTTCACGAGA AAGTAGGGGC TATGCTGAAG TCTTCTCATA TTAACAATGT GTATCTTTAT
GGAAGCGATA TGAAATACGC TTACGATGTT TTAAAACTTT CCAACAAAGA AGTTTTTTAC
TTTGATAATC AAGAGGAGTT GTCTTTTCAT CTTGTTAAAA GCCTAAAACA AAAAACCGAT
ACCAATACAA TGATTTTGGT AAAAGGCTCT AGAGGCATGA AGATGGAAAA TGTTGTGGAT
AGGCTTGTAA ATGGTTTATA A
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| Protein sequence | MNSLEVSKSL GLIHEGKPFF IKDVFFDSRE SIKDALFVAI KGEKTDGHLY IKNLLDENIA
GFLVREDFDC KEILAKGKSC LKAKDTIKAL QDIASLKRNS LKANVVAIAG SAGKTTTKEL
IAHVLPGKVH KTYKNFNSQI GLPKVVITAD DDIGYLVLEM GATALEDVKK LTNIAKQHIG
VISSIGEEHL ESFGSIENVV KGNFEVFDSP NLLSGVYPKA FHSFYKKEYG LSFCRFRDDA
DIRVKNVYID EEGTHFEIMG IRLTIPVLSI GIAESAAAAV GVLASFGIDW KELKDRFESF
KGVQGRMQLI KKGPFRIIDD TYNANPVSVK NAILTIDSFK DFNKIIVLGD MLEMGEYSKA
LHEKVGAMLK SSHINNVYLY GSDMKYAYDV LKLSNKEVFY FDNQEELSFH LVKSLKQKTD
TNTMILVKGS RGMKMENVVD RLVNGL
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