| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1361 |
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| Symbol | |
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| ID | 6744185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 1274707 |
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| End bp | 1276818 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642751177 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_002122024 |
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| Protein GI | 195953734 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.011666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGT TAGATAAAAC CAACGAAAAA CTCATAGAAG ATATTTTAAA CAAATACAAA
GAGCATGAGG ATGTTATAAG CAAAGCTATA GATTTTATAT ATCAAAAGCA TGAAAACCAA
ACAAGAAAAT CTGGAGAACC CTACGTAAAC CATCCTATAG CAGTAGCCAG CATATTAGCT
TCTATAGGGA TGGATTATCA TAGTATTGTG GCTGGGCTTT TACACGACGT AGTAGAAGAT
ACTGATACTA CCGTTGAGGA GATAAAAAAA GAGTTTGGCC CTCAGATCGC AAGCCTAGTG
GATGGCCTTA CCAAGATAGA CAAGTATAAG TTTTCTTCAA AAGAACATGC AAAGGCTGAA
AACTATAGGA AAATGCTTTT TGCTATGTCA AAGGATGTAA GGGTCATAGT CATAAAGCTA
GCAGACAGAC TACACAACAT GAGAACCCTT GATTACATGC CGAGGCACAA ACAGCTTGAA
ATAGCCAATG AGACTATAGA TATATACGCT CCGATAGCCC ATAGGCTTGG AATATGGAGC
ATAAAGAAAG AGCTGGAAGA CCTTTATTTA AAATACACGC ATCCTGAAGA GTACGAAAAA
ATAAAAGATT TTGTCCAAAA AATAAGTACA GAATCAGAGG TTTATCTAAA AAAATACTTT
ATATCGAAAG TGGTAGAAGC CATAAACGAT TTTTTCAAAG ATAAAAAACC AAACTACACC
ATACAATATA GACAAAAGCA TATATACAGC ATATATCAAA AGCTAAAACG AAAAAATCTA
AGCTTGGAGG ATTTACAGGA TATTCTTGGC ATAAGGGTGA TAGTAGAGGA TGTGGCAGAG
TGTTATACTG TTTTAGGTAT AGTTCATAGT ATTTTTAGGC CTATACCAGG AAGCTTTGAT
GATTACATAT CGCTTCCAAA ACCAAACATG TACCAATCTC TTCATACTGC CGTGGAAGGG
CCCAAAAAGA GAGTTGTGGA GGTACAGATA AGGACTTACG AAATGCACGA GAGAGCTGAA
AAGGGTATAG CAGCTCACTG GGCTTACAAA GAAAATTCCT CTACAAAAGA CAACTCCATA
TTTGCATGGT TAAGAGAGGT GTTAAATAGC ATAAAAACCA AAAACGCCAA TGAGCTCATA
GAAGCTGTTA AAGATGAGCT TTTCGAAGAT GAGGTATTTG TATTTACTCC AAAAGATGAT
GTTGTAGTGC TTCCAAAAGG TGCAACGGTG CTTGATTTTG CATATTACAT ACATACAGAT
ATAGGAAACC ACTGTCAAAG GGCTATAGTA AACAACAAGA TAGTGCCTCT TTCTTATGTG
CTTCAAAGCG GTGATAGGGT AGAAATTATA ACAAACCCCT CTCAAAGCCC AAAAATAGAA
TGGCTTAAGA TTGTAACCAC AAAAAAAGCA AAAACTCGTA TTAGGCTTTT CTTGAAAGCA
AAAGAAAAAG AAGTGGCTAT AGAAGAAGCT CACAAAACCC TTTTAAAGCT TTCAGAGAAA
CTAAGTTTAG GTTTCGAAGA TATGATAAAA AAACTCAGTT CTCATTTTGA TTTAAACGAG
CAGGAGCTTT TTGCAAACAT AGGTTTTGGT AAAATCCCAA TAAACAGGGT AATAAAGCTG
TTTTCCAAAG AAAAAGAGCA AAAACATATA AAAGACGAGG GTAAAGAGGG GTCTTTAAAA
CTTGAGAGCG TATCAAACGT GCTTTTTAGT GTAGCGAAGT GTTGTATGCC AATTCCAGGA
GATCCAGTAA TGGGGGTTAT ATCAAAAAAC GCTGGTATTG TTATACATCA TGAGAAATGC
CCAAACCTTC AATACGCCAT TAGAAATATA CCTCAAAAAG TGGTAAAAAT AGACTGGAAG
TCCCAAGACA AGTTATATAC CACAAGGATG AGAGTTGTAG CTTCAGATAG ACCTGGCATA
CTTTCAGAAG TGTCTTCTGC TTTTACAAAA TCAAACATAA ACATAGTAGA AGCTTCTACA
AAAACCAACA ACCTCAACAT AGCAAACATG GATTTTAAAG TGCAATTAAG AAACACAAAA
GACTTAAAAA GAGCTTTTGA CGAAATAAAA TCTATAAAAG GTGTAGAATC TGTAAAAAGG
GTGTTTGGAT GA
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| Protein sequence | MKTLDKTNEK LIEDILNKYK EHEDVISKAI DFIYQKHENQ TRKSGEPYVN HPIAVASILA
SIGMDYHSIV AGLLHDVVED TDTTVEEIKK EFGPQIASLV DGLTKIDKYK FSSKEHAKAE
NYRKMLFAMS KDVRVIVIKL ADRLHNMRTL DYMPRHKQLE IANETIDIYA PIAHRLGIWS
IKKELEDLYL KYTHPEEYEK IKDFVQKIST ESEVYLKKYF ISKVVEAIND FFKDKKPNYT
IQYRQKHIYS IYQKLKRKNL SLEDLQDILG IRVIVEDVAE CYTVLGIVHS IFRPIPGSFD
DYISLPKPNM YQSLHTAVEG PKKRVVEVQI RTYEMHERAE KGIAAHWAYK ENSSTKDNSI
FAWLREVLNS IKTKNANELI EAVKDELFED EVFVFTPKDD VVVLPKGATV LDFAYYIHTD
IGNHCQRAIV NNKIVPLSYV LQSGDRVEII TNPSQSPKIE WLKIVTTKKA KTRIRLFLKA
KEKEVAIEEA HKTLLKLSEK LSLGFEDMIK KLSSHFDLNE QELFANIGFG KIPINRVIKL
FSKEKEQKHI KDEGKEGSLK LESVSNVLFS VAKCCMPIPG DPVMGVISKN AGIVIHHEKC
PNLQYAIRNI PQKVVKIDWK SQDKLYTTRM RVVASDRPGI LSEVSSAFTK SNINIVEAST
KTNNLNIANM DFKVQLRNTK DLKRAFDEIK SIKGVESVKR VFG
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