Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_1357 |
Symbol | |
ID | 6744181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 1268243 |
End bp | 1270948 |
Gene Length | 2706 bp |
Protein Length | 901 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642751173 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_002122020 |
Protein GI | 195953730 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000351362 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAACTT CTGATTGCGT ATACAAAGAA AGCATAAAAA AATTGATAGA TGATTACCTA GATACAGGGA TTATAGATGA AGAAACCATA AAGAAGATAG GGTATGAAGC CTATGATAAA ACTCATATAA ACTATATAAA ACACAATATA GAGAATATAA AAAATAGCTT TATAAAAGAA TACTTCAAGA GCCACGAATT TACAGAGGAA GCTTACGACA AGATATACTC TTTCTTTAAA ATTCTTGAAA AAAATATATC AAGAGCTTAC GGTATAAGGT GTATAGAAGA TTCAGAAACG TTGGAATCTA CTTTGTATGC TGAGGATATA TTACCAGAGC TTTTAAAACC AAGCGCACAA TTTAAAGCCG CTATAACAAA AGATTATCTT GAATTAAACG AAACACCTTC CATAACGATG GATGCAAAAT CTTGCCCAGT CTACAAGGAA ATAGAAAACT CAGCAATGCC AAAAGATGTT AAAGAGAATG TTCATAAAGC ACACGAGAGG CTTCATTATG CCGCTCAATA CTTTTATAAG CTTATAAAAG AAAAAGACAC AGAAAATCTA TACGGTATAT ACTGGCGTAT GAGATATCTA AATATCTTAA TAGTAACTGC TATAGCTATC TATACTCTAA AAGATCAAAA TGAATTTTAC AAGACATTTT TTGAAGGACA CAGTATACCC ATGCTTTTGG TAGATCCAGA TACCTACAGC ATAGCAAACG CCAATCAGGC CGCTCTTGAT TTTTATGGAT ACACAAAAGA AGAAATAACT ACTTTGAAAA GTTGGGATAT AAACACTTTA GGCGAAAAAG AAATGAAAGA ACTCATATCA AAAGCCAAAA ACAAAGAGCT AAACTTCTTT AAGTTTAAGC ACAGATTAAA ATCTGGAGAG ATAAGAGATG TGGAAGTTTA CTCATCCCCT GTTTATCTGG GTGGTAAAAT ATACCTTTTG TCCATCGTAT ATGATGTTAC GAAAGAAGAA AGGGCTAAAA AATTTTTAGA AATCTTAAAA GAGATAGATA GTCTTAGCAA CATCTCTGAC ACAGAAGAAG AATTTATAGA AAATCTTTTT AGATTTTTAG AAAAAGAGGA TATATCAAAA GATGTATGTT TTATGATAAA CCAAGAAGGC AAAACCAAAA TAAGTTCGTC ATCAGAAAGC TGTATTCAAA ATGTAAAAGA TAAAGAAGAA AATTTTCCCA TATTTGAGGC TTTTTATCTT AAAATCCCTG TTTACCATAA AAATATGGAA GATATAGAAG ATGAGTTTGT AAGAAAGAAG CTTTTAGAAA GAGGGACCGT CTCATCCTTT GCAGTGCCTG TATTGAAAGA TGGTAAGCCC TACGGAGCCC TTTGCATATG TTCAAACATT AAAGGCTACT TTGAAGATTA TGGGTTTTTC ATCACACAGC TTAAAGAAAA GATAGAAAAT GCATTAAAAC ACATAAATCT TAGAAAAGAG TTAAACTATA GGAATGAACT TCTTAAAAAT ATAGTAGAGA ATACTCAAAT AGGTGTGGTG GTATTTGATA TAGATAATAT TTATTATACA AACAGATACT TTCTTGAGCT TTTAGGATAT GACGAAGATA CGATAAAAGA AATAAGCATA TTTGATATAT TTTCTCCAAT ACACACGAAA GATCTTATAG AAGCCTTCCC AAACAAAAAA TCGATACTTT TACAAGAGTT TAACCTGATA AATAAAAATA ACCATCTTGT ATATGTAAAG GGCTCTTTAA CCCTAACAAA AGATTTAAGC GGTAAAGATA TCGCTATATT TAGCTTTGTA GATACCACAC AAGAAAAGCA ACTAAAAGAC ATACTAACAC GTGAGAAAAA AACATTAGAA AATATATTAG ATAGAGCAAA CTTTGGGGCT TTTATATTTA AACTAAAAAA TTTAGAAAAT CTAGAGATAG AAATTATATA TAAAAATAAA TATTTTGACA CTATGATAAA AAATCAAGGT ATAAAAACTT TCGAAGATTT TCTTATATTT GATGATGATA AAAAAGAACT AATGAAGAGA TATTTGAGGA AAATTACAGC AGACGAGGGT GGAGTTTTTA CTATAAACGA TATTATTATG AAACAAGATA AAAATATTGT GCTAAAACTA AACATGAACC GAATAAACCA AAACCATGAA ACACTGATAC TTTGTATACT TCAAGATATC ACAGAAGAGT CAATGATTAT AAAATATTTT GAAGAACTAT CTATAAAAGA CGACCTAACT GGAATATGCA ACAGAAGGTG TTTAGAAGAT AAGCTAGAAG AGTATCTAAC CCTTGCAAAA AGATACAACA GGCCTTTAAG CGTTATTATG TTTGACATAG ATTTTTTCAA ACACATAAAT GACTCCTATG GACACGATAT AGGAGACAAA GTGTTAAAAA CTATAGCAAA TATAGTCTTA TCAAACATAA GAGCCACAGA CATATTGGCA AGATACGGTG GTGAGGAGTT TGTTATAATA TCGCCAGAAA CCACTTTAGA GGATGCGAAA GCCTTGGCTG AAAAACTAAG AAAAGAAATA GAAAATTTTC TTTTTGAAGA AGGTTTTAGT ATAACATGCT CCTTTGGTGT TACATCGCTA AACCAAGAAG ATACAAAAGA AACCATTTTA AAACGAGTAG ACGAAGCCCT TTACAAAGCA AAGAGAGAAG GGAGAAACAG AGTAGTGGCC TCTTAA
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Protein sequence | METSDCVYKE SIKKLIDDYL DTGIIDEETI KKIGYEAYDK THINYIKHNI ENIKNSFIKE YFKSHEFTEE AYDKIYSFFK ILEKNISRAY GIRCIEDSET LESTLYAEDI LPELLKPSAQ FKAAITKDYL ELNETPSITM DAKSCPVYKE IENSAMPKDV KENVHKAHER LHYAAQYFYK LIKEKDTENL YGIYWRMRYL NILIVTAIAI YTLKDQNEFY KTFFEGHSIP MLLVDPDTYS IANANQAALD FYGYTKEEIT TLKSWDINTL GEKEMKELIS KAKNKELNFF KFKHRLKSGE IRDVEVYSSP VYLGGKIYLL SIVYDVTKEE RAKKFLEILK EIDSLSNISD TEEEFIENLF RFLEKEDISK DVCFMINQEG KTKISSSSES CIQNVKDKEE NFPIFEAFYL KIPVYHKNME DIEDEFVRKK LLERGTVSSF AVPVLKDGKP YGALCICSNI KGYFEDYGFF ITQLKEKIEN ALKHINLRKE LNYRNELLKN IVENTQIGVV VFDIDNIYYT NRYFLELLGY DEDTIKEISI FDIFSPIHTK DLIEAFPNKK SILLQEFNLI NKNNHLVYVK GSLTLTKDLS GKDIAIFSFV DTTQEKQLKD ILTREKKTLE NILDRANFGA FIFKLKNLEN LEIEIIYKNK YFDTMIKNQG IKTFEDFLIF DDDKKELMKR YLRKITADEG GVFTINDIIM KQDKNIVLKL NMNRINQNHE TLILCILQDI TEESMIIKYF EELSIKDDLT GICNRRCLED KLEEYLTLAK RYNRPLSVIM FDIDFFKHIN DSYGHDIGDK VLKTIANIVL SNIRATDILA RYGGEEFVII SPETTLEDAK ALAEKLRKEI ENFLFEEGFS ITCSFGVTSL NQEDTKETIL KRVDEALYKA KREGRNRVVA S
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