Gene HY04AAS1_1357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHY04AAS1_1357 
Symbol 
ID6744181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHydrogenobaculum sp. Y04AAS1 
KingdomBacteria 
Replicon accessionNC_011126 
Strand
Start bp1268243 
End bp1270948 
Gene Length2706 bp 
Protein Length901 aa 
Translation table11 
GC content31% 
IMG OID642751173 
Productdiguanylate cyclase with PAS/PAC sensor 
Protein accessionYP_002122020 
Protein GI195953730 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000351362 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACTT CTGATTGCGT ATACAAAGAA AGCATAAAAA AATTGATAGA TGATTACCTA 
GATACAGGGA TTATAGATGA AGAAACCATA AAGAAGATAG GGTATGAAGC CTATGATAAA
ACTCATATAA ACTATATAAA ACACAATATA GAGAATATAA AAAATAGCTT TATAAAAGAA
TACTTCAAGA GCCACGAATT TACAGAGGAA GCTTACGACA AGATATACTC TTTCTTTAAA
ATTCTTGAAA AAAATATATC AAGAGCTTAC GGTATAAGGT GTATAGAAGA TTCAGAAACG
TTGGAATCTA CTTTGTATGC TGAGGATATA TTACCAGAGC TTTTAAAACC AAGCGCACAA
TTTAAAGCCG CTATAACAAA AGATTATCTT GAATTAAACG AAACACCTTC CATAACGATG
GATGCAAAAT CTTGCCCAGT CTACAAGGAA ATAGAAAACT CAGCAATGCC AAAAGATGTT
AAAGAGAATG TTCATAAAGC ACACGAGAGG CTTCATTATG CCGCTCAATA CTTTTATAAG
CTTATAAAAG AAAAAGACAC AGAAAATCTA TACGGTATAT ACTGGCGTAT GAGATATCTA
AATATCTTAA TAGTAACTGC TATAGCTATC TATACTCTAA AAGATCAAAA TGAATTTTAC
AAGACATTTT TTGAAGGACA CAGTATACCC ATGCTTTTGG TAGATCCAGA TACCTACAGC
ATAGCAAACG CCAATCAGGC CGCTCTTGAT TTTTATGGAT ACACAAAAGA AGAAATAACT
ACTTTGAAAA GTTGGGATAT AAACACTTTA GGCGAAAAAG AAATGAAAGA ACTCATATCA
AAAGCCAAAA ACAAAGAGCT AAACTTCTTT AAGTTTAAGC ACAGATTAAA ATCTGGAGAG
ATAAGAGATG TGGAAGTTTA CTCATCCCCT GTTTATCTGG GTGGTAAAAT ATACCTTTTG
TCCATCGTAT ATGATGTTAC GAAAGAAGAA AGGGCTAAAA AATTTTTAGA AATCTTAAAA
GAGATAGATA GTCTTAGCAA CATCTCTGAC ACAGAAGAAG AATTTATAGA AAATCTTTTT
AGATTTTTAG AAAAAGAGGA TATATCAAAA GATGTATGTT TTATGATAAA CCAAGAAGGC
AAAACCAAAA TAAGTTCGTC ATCAGAAAGC TGTATTCAAA ATGTAAAAGA TAAAGAAGAA
AATTTTCCCA TATTTGAGGC TTTTTATCTT AAAATCCCTG TTTACCATAA AAATATGGAA
GATATAGAAG ATGAGTTTGT AAGAAAGAAG CTTTTAGAAA GAGGGACCGT CTCATCCTTT
GCAGTGCCTG TATTGAAAGA TGGTAAGCCC TACGGAGCCC TTTGCATATG TTCAAACATT
AAAGGCTACT TTGAAGATTA TGGGTTTTTC ATCACACAGC TTAAAGAAAA GATAGAAAAT
GCATTAAAAC ACATAAATCT TAGAAAAGAG TTAAACTATA GGAATGAACT TCTTAAAAAT
ATAGTAGAGA ATACTCAAAT AGGTGTGGTG GTATTTGATA TAGATAATAT TTATTATACA
AACAGATACT TTCTTGAGCT TTTAGGATAT GACGAAGATA CGATAAAAGA AATAAGCATA
TTTGATATAT TTTCTCCAAT ACACACGAAA GATCTTATAG AAGCCTTCCC AAACAAAAAA
TCGATACTTT TACAAGAGTT TAACCTGATA AATAAAAATA ACCATCTTGT ATATGTAAAG
GGCTCTTTAA CCCTAACAAA AGATTTAAGC GGTAAAGATA TCGCTATATT TAGCTTTGTA
GATACCACAC AAGAAAAGCA ACTAAAAGAC ATACTAACAC GTGAGAAAAA AACATTAGAA
AATATATTAG ATAGAGCAAA CTTTGGGGCT TTTATATTTA AACTAAAAAA TTTAGAAAAT
CTAGAGATAG AAATTATATA TAAAAATAAA TATTTTGACA CTATGATAAA AAATCAAGGT
ATAAAAACTT TCGAAGATTT TCTTATATTT GATGATGATA AAAAAGAACT AATGAAGAGA
TATTTGAGGA AAATTACAGC AGACGAGGGT GGAGTTTTTA CTATAAACGA TATTATTATG
AAACAAGATA AAAATATTGT GCTAAAACTA AACATGAACC GAATAAACCA AAACCATGAA
ACACTGATAC TTTGTATACT TCAAGATATC ACAGAAGAGT CAATGATTAT AAAATATTTT
GAAGAACTAT CTATAAAAGA CGACCTAACT GGAATATGCA ACAGAAGGTG TTTAGAAGAT
AAGCTAGAAG AGTATCTAAC CCTTGCAAAA AGATACAACA GGCCTTTAAG CGTTATTATG
TTTGACATAG ATTTTTTCAA ACACATAAAT GACTCCTATG GACACGATAT AGGAGACAAA
GTGTTAAAAA CTATAGCAAA TATAGTCTTA TCAAACATAA GAGCCACAGA CATATTGGCA
AGATACGGTG GTGAGGAGTT TGTTATAATA TCGCCAGAAA CCACTTTAGA GGATGCGAAA
GCCTTGGCTG AAAAACTAAG AAAAGAAATA GAAAATTTTC TTTTTGAAGA AGGTTTTAGT
ATAACATGCT CCTTTGGTGT TACATCGCTA AACCAAGAAG ATACAAAAGA AACCATTTTA
AAACGAGTAG ACGAAGCCCT TTACAAAGCA AAGAGAGAAG GGAGAAACAG AGTAGTGGCC
TCTTAA
 
Protein sequence
METSDCVYKE SIKKLIDDYL DTGIIDEETI KKIGYEAYDK THINYIKHNI ENIKNSFIKE 
YFKSHEFTEE AYDKIYSFFK ILEKNISRAY GIRCIEDSET LESTLYAEDI LPELLKPSAQ
FKAAITKDYL ELNETPSITM DAKSCPVYKE IENSAMPKDV KENVHKAHER LHYAAQYFYK
LIKEKDTENL YGIYWRMRYL NILIVTAIAI YTLKDQNEFY KTFFEGHSIP MLLVDPDTYS
IANANQAALD FYGYTKEEIT TLKSWDINTL GEKEMKELIS KAKNKELNFF KFKHRLKSGE
IRDVEVYSSP VYLGGKIYLL SIVYDVTKEE RAKKFLEILK EIDSLSNISD TEEEFIENLF
RFLEKEDISK DVCFMINQEG KTKISSSSES CIQNVKDKEE NFPIFEAFYL KIPVYHKNME
DIEDEFVRKK LLERGTVSSF AVPVLKDGKP YGALCICSNI KGYFEDYGFF ITQLKEKIEN
ALKHINLRKE LNYRNELLKN IVENTQIGVV VFDIDNIYYT NRYFLELLGY DEDTIKEISI
FDIFSPIHTK DLIEAFPNKK SILLQEFNLI NKNNHLVYVK GSLTLTKDLS GKDIAIFSFV
DTTQEKQLKD ILTREKKTLE NILDRANFGA FIFKLKNLEN LEIEIIYKNK YFDTMIKNQG
IKTFEDFLIF DDDKKELMKR YLRKITADEG GVFTINDIIM KQDKNIVLKL NMNRINQNHE
TLILCILQDI TEESMIIKYF EELSIKDDLT GICNRRCLED KLEEYLTLAK RYNRPLSVIM
FDIDFFKHIN DSYGHDIGDK VLKTIANIVL SNIRATDILA RYGGEEFVII SPETTLEDAK
ALAEKLRKEI ENFLFEEGFS ITCSFGVTSL NQEDTKETIL KRVDEALYKA KREGRNRVVA
S