| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1336 |
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| Symbol | |
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| ID | 6744155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 1245364 |
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| End bp | 1247037 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642751147 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_002121999 |
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| Protein GI | 195953709 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0436737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAGTG CTTTAGGTAG GCATGTTGTT GTTAAAAGTC AAATACAGAG TTTAGATGAT
TCGGCGGATT TATATAGCTT AGTTTTTAAT ACGCTTCTTG GCCTTAGAAA TATAAATATT
GAAGATTTGG ATGTAAAGTT GAAAAATATA CCAAGTTTTG AGCTTTTACC AAACATAAAC
CAAGCCGTAG ATAGACTTGT AAAAGCCATA AAATCTAAAG AAAGGATACT GCTTTACGGA
GATTACGATG TGGACGGGGT TACTTCTACT ACCATCATGT ACGATTTTTT AAAGCAAATA
GGTGCCAACG TAGTACCGGT GCTTCCAAAC AGAAACTCCG GCTACGGGCT TTCAAAGGAG
ATTATAGATT TATTCTCAAA GTATTCTAAC TTAGTGCTTA CATTAGACAA CGGTACCACA
GCCGTTCATG AGACAAAATA TGCAAAAGAA AAATACAATA TGGATTTTAT CATTTTAGAC
CATCATATGA TAAATCATGG AGAACATTTG CCTGAGGCTA TATTGGTAAA TCCAAACTTA
GAAAAAGACA ACAAACTAAA AGGCCTATGC ACAGCTGGGC TTTCCTTTTA TATGGTGGGG
GCTTTAAGAA GGGCTTTGGG TGTAGATTTT GATATAAAAA AATATCTTGA TTTGGTGGCA
GTAGGTACTG TAGCAGATGT GATGCCGATA AATTCATTAA ACAGAGTCCT CATATCTAAA
GGTCTTGAGC TTATAAACAA GATAAAAGAT ATGCCTTGGG ATATGGCTAC AGATTTTGGA
AAAGCTGGTA TGAAAGCCCT TATAAACTAC ATATCAAAAA CCCAAAACGG AAATCAAAAG
ATAATCACCG CCAAAGATAT AGGATTTTCA ATAGCCCCAA GAATAAACGC CGCAGGTCGC
ATAAGAAAAC CTCAAATAGC TTTGAAGCTT TTGGCGGAAA AAAACTATGA GAAAGCTAGA
ATCTTAGCTG AAGACTTAAA CAAGATAAAC CAAGATAGAA GAAGAATATC AAACGAGATG
TTTAAAGAGG CTTATAGCCT TGCCTCTCAG TCCAACGATG ATTTTGTGAT ACTTGGAAAA
CAAACGTGGC ATCATGGGGT TCTTGGAATT GTGGCTGGAA GACTTTCTAA CAAGCTTAAA
AAACCAACAG GTATATTTCA CATCAACAAC ACTCACGCGG TTGGCTCTAT AAGATCTGTG
GAAGGTCTTG ATGTTCATAA GCTTTTATCA AATTTAAGCT ATATGTTTGA TAAATGGGGA
GGTCATGCTG GAGCAGCTGG GGTTACCATT AAAAAAGAAT ATTTTGATGC TTTTAGACAA
AAGATAAACG ATTTATTAAA GAGAGAATCC TTTGAAGTGG ATAGGGTTTT AGAGGTGGAT
ATGGAACTTC CCCTAAGAAG CGTTGATAAA CGTATTGGAG AAATAATAGA GAAGCTATCT
CCATATGGTG AACTAAACCC AGAACCGATT TTTATATCTC AAGATATCAC CGTATCTTCT
ATATCAAGCA AAGGCGTAGG CGTAAGGGTG AAAACCTTAG ACAAAGATAA AGAGGTAGAG
CTAAGCTGTT TTGAAGAGGA GCTTTTTGTA AAACTAAGAC CTGGTCAACG TTTAAAAGCC
ATATACAACA TAGATTCTTA TGGAATAAAC ATGATAGATG TGGTATTTTG TTGA
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| Protein sequence | MISALGRHVV VKSQIQSLDD SADLYSLVFN TLLGLRNINI EDLDVKLKNI PSFELLPNIN
QAVDRLVKAI KSKERILLYG DYDVDGVTST TIMYDFLKQI GANVVPVLPN RNSGYGLSKE
IIDLFSKYSN LVLTLDNGTT AVHETKYAKE KYNMDFIILD HHMINHGEHL PEAILVNPNL
EKDNKLKGLC TAGLSFYMVG ALRRALGVDF DIKKYLDLVA VGTVADVMPI NSLNRVLISK
GLELINKIKD MPWDMATDFG KAGMKALINY ISKTQNGNQK IITAKDIGFS IAPRINAAGR
IRKPQIALKL LAEKNYEKAR ILAEDLNKIN QDRRRISNEM FKEAYSLASQ SNDDFVILGK
QTWHHGVLGI VAGRLSNKLK KPTGIFHINN THAVGSIRSV EGLDVHKLLS NLSYMFDKWG
GHAGAAGVTI KKEYFDAFRQ KINDLLKRES FEVDRVLEVD MELPLRSVDK RIGEIIEKLS
PYGELNPEPI FISQDITVSS ISSKGVGVRV KTLDKDKEVE LSCFEEELFV KLRPGQRLKA
IYNIDSYGIN MIDVVFC
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