| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1323 |
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| Symbol | |
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| ID | 6744142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 1231859 |
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| End bp | 1233184 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642751134 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002121986 |
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| Protein GI | 195953696 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATCTA TCGTTTTAAA CAGTTTGTTG GTATTTTCTA CTTTGTTAAA CATAGGGCTT
GTTGTATTTA TATTAAAAAT ATTAAGAAAA TCCGAGGATA AAACCTTAGA AAAGCTTTTT
AGCATCGGGT TTCCAATACT TATAGTTTCA AAAGATGGTA ACATTGTAAA AACTAACGAT
TTTGCCGCTT CTTTTTATGG AATATCAAAA GAAGAGTTAG AAAATAAAAC TGTTTTTGAC
ATAAACACGG CAGGAAAAGA ATATCTTATG GAATTTATAA AAAGAGGACT TGAAAACTCT
TATCAAAGAT GTCTGTTCAA ACATAAAACC AAATACGGAG AAAAAGATGT AGAAACCAGT
GTAATACCAA TAACCTACAA AGGCAAAAAA CATCTTCTAT GCATAGTAGA AGACATATCA
GAGAAGACTC ATATAAAAAC CGAGCTTGAG TTAAAGGAGG AGTTACTTAA AAATATATAT
GAAAACGCAC AGGTCTGCAT ATTGATATAC GACGAAGAAT TCAGGATATT ACAAGCCAGT
CCATGGTGTT TTAGGCTTTT AGAGTATAAG ATAGAAGAGC TTAACGGTAA AAAAATTACA
GATATAATAG TAGAAAACAA CGAAAGCACT ATAAGTGTTT TAAAACCGAG GCCTTATCAA
AAAATAGCTG GTGTTTTTAC GCTCAAAAGA GCAAACGGCA AACCCATACA AGCAAAATTA
ATAACATCGG TAATCATTCA TCAAGCAAAC ATGCTAAACA TAGCTACAAT ATACGATATT
CAAGAAGAAC TAAAGCAAAG AGAAGTGTAT AAGGTGCTAT CAGAAACAGA TGAACTTACA
AAAGCCTACA ACAGAAGATT CTTTGATGAG ATTTTAGATG CTTTAGTAGA TGCTTACAAA
AACAAAACGG CTCCTTTTTC TCTAATAATA TTTGATATAG ATGATTTTAA AAAAATAAAC
GACACCTATG GACACGACGC TGGGGATTTG ATACTAAAAC GTATATCGGA GCTCGTGAAA
GCCAACATAA GACAAGAAGA TATTTTTTGT AGGATAGGTG GGGAAGAGTT TGCCATTATA
CTAAAACAGA TAGATATATT TGGAGCGTAT GTTGTTTCAG AAAAACTAAG GAAAATAGTA
GAAACTACAA ACTTCACTTA CAAGGACAAA ACTATAAAAA CCACCATTAG CCTTGGCGTA
GCTGAGTTTG GTAAAAACGA TACAAAAGAA ACCTTGTTTA AAAAAGCCGA TAGAGCATTG
TATGTATCAA AAACCTCTGG TAAAAACATG AGTTATTTAT TTTTTGGAGA TTTTATGGAA
GTATGA
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| Protein sequence | MKSIVLNSLL VFSTLLNIGL VVFILKILRK SEDKTLEKLF SIGFPILIVS KDGNIVKTND
FAASFYGISK EELENKTVFD INTAGKEYLM EFIKRGLENS YQRCLFKHKT KYGEKDVETS
VIPITYKGKK HLLCIVEDIS EKTHIKTELE LKEELLKNIY ENAQVCILIY DEEFRILQAS
PWCFRLLEYK IEELNGKKIT DIIVENNEST ISVLKPRPYQ KIAGVFTLKR ANGKPIQAKL
ITSVIIHQAN MLNIATIYDI QEELKQREVY KVLSETDELT KAYNRRFFDE ILDALVDAYK
NKTAPFSLII FDIDDFKKIN DTYGHDAGDL ILKRISELVK ANIRQEDIFC RIGGEEFAII
LKQIDIFGAY VVSEKLRKIV ETTNFTYKDK TIKTTISLGV AEFGKNDTKE TLFKKADRAL
YVSKTSGKNM SYLFFGDFME V
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