Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_1319 |
Symbol | |
ID | 6744138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 1226461 |
End bp | 1228293 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642751130 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_002121982 |
Protein GI | 195953692 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.104887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAACTTAC TCCCCCCCCC CCCCCCCCCC CCCCCCATAA CTTTTGACGC TCGCGCTTGT CCTGGATACG ATCTTATAGA AAATGCAGCA GTAGAAGATG ATATAAAAAA AGAGCTTCAC AAAGCTCACG AGAGGATTCA TTGTGCAGCT AAATATTTTT ACAAGCTTAT AGAACAAGGT GATATCGACA ATCTTTACGA TATATACTGG AATATAGAAT ATCTAGGCAT CTTGATAATA ACAACCGTAG CTCTTCACAA GTTAAAAGAT CAAAATGAAT TTTACAAGAC ATTTTTTGAA GGACACAGTA TACCCATGCT TTTTGTGGAT ATAGATACTT ATTCTATAGT GGATGCAAAC AAAGCAGCCC TTATGTTTTA TGGTTATACC AAAGAAGAGA TTACGTCTTT GAAAAATTGG GATATAAACA TACTTGGCGA AGAAAAGATG AAAGAACTTG TTCACAAAGC AAAACATAAA GAGCTAAACT TCTTTAAGTT TAAGCACAGA TTAAAATCTG GCGAGATAAG AGATGTGGAA GTTTATTCAT CCCCTGTTCG TCTAAATGGC AAAACTTACT TACTTTCAAT AATAAACGAT ATTACAAAAG AAGAGAGAAC AAGAAGAGTC TTGGAGATAT TTAAAGAGAT AGAAAATCTT GGCATTACAT CTGATAACGA AGATATATTT TTTGAAAAGC TTTTAGATGT GCTTGAAAAA GAGGATATGT TTAAAGATGT ATGTATATTG ATAAGGCACA AGGGCACCGA TGATACGATA TCTTCATCAA AGACACGCCT TGAGGACATA GGAGAATCTT TATCCTCTTA TATCATACAT ATATTAAAAA ATGGTGATAC ATACGGTTCT ATCAGGCTAT ACTCCAAAAA AGAAAATTAC TTCGATGAGT ATCAAGAAAT CTTGCTAAAT TTGAAAGATA AAATAGAGCA TACGCTAAAT ACCATAGAAC TAAAGAAAAA ATTAGATTAT CAGAACAAGC TTGTTAAAAG TATCATCCAG AATACCAAGA TAGGCGTTTT GGTATTTGAT ATGGATGGTG TTTATTATGC AAATGACTAC TTTTTTGAGC TTTTAGGATA CGATTTTGAT GAGCTAAAAG CTTTAACCAT ATTTGATATA TTATCACCTA TTCATGTAAA AGACCTTATA GATGCTTTTG CAAACAAAAT GCCTATACTT TCACAGGAGT TCCATGTTTT TAAAAAAGAC AATAAAATAC TTTTTGTAAA AGGGACTTTA GATTTTATCA GAAATCCTGA AAACAAAGAC AACGCTGTTT TCACATTTGT TGATATTACC AAGGAAAAAG AGTTGTCTGA GCTATTGTTA AAACAATCCA TTGAAGATAC TCTTACAGGA ATTTACAACA GAAGGTATCT TAAAGATAAA TTAGAAAGGC ATGTAAATTT GGCAAAAAGA TACGAAAGAC CACTTAGTGT TATTATGTTT GATATAGATT TTTTCAAGCA TATAAACGAT ACTTTTGGTC ACGATGTGGG TGATAAGGTG CTGATAGCTA TTTCAAAAGT GGTATCAGAG AACATAAGAA ATACCGATAT CTTTGCAAGA TACGGCGGTG AGGAGTTTAT CATTGTAGCT CCAGAGACTA CAAAAGAAGA TGCCAAAATA TTAGCTGAAA AACTAAGAAG TCTTATAAGA AATCTTCATT TTGAAGAAGG GATCAACGTA ACTTGCTCTT TTGGCGTGGT GTCGTTAGAA AAGCCCGATA CAAAAGAAAC GCTTTTAAAA CGTGTTGATA ATGCTCTTTA CGAGGCCAAA AGAACTGGAA GGAACAGGGT GGTAGTATTG TAG
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Protein sequence | MNLLPPPPPP PPITFDARAC PGYDLIENAA VEDDIKKELH KAHERIHCAA KYFYKLIEQG DIDNLYDIYW NIEYLGILII TTVALHKLKD QNEFYKTFFE GHSIPMLFVD IDTYSIVDAN KAALMFYGYT KEEITSLKNW DINILGEEKM KELVHKAKHK ELNFFKFKHR LKSGEIRDVE VYSSPVRLNG KTYLLSIIND ITKEERTRRV LEIFKEIENL GITSDNEDIF FEKLLDVLEK EDMFKDVCIL IRHKGTDDTI SSSKTRLEDI GESLSSYIIH ILKNGDTYGS IRLYSKKENY FDEYQEILLN LKDKIEHTLN TIELKKKLDY QNKLVKSIIQ NTKIGVLVFD MDGVYYANDY FFELLGYDFD ELKALTIFDI LSPIHVKDLI DAFANKMPIL SQEFHVFKKD NKILFVKGTL DFIRNPENKD NAVFTFVDIT KEKELSELLL KQSIEDTLTG IYNRRYLKDK LERHVNLAKR YERPLSVIMF DIDFFKHIND TFGHDVGDKV LIAISKVVSE NIRNTDIFAR YGGEEFIIVA PETTKEDAKI LAEKLRSLIR NLHFEEGINV TCSFGVVSLE KPDTKETLLK RVDNALYEAK RTGRNRVVVL
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