| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1260 |
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| Symbol | |
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| ID | 6744078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 1166271 |
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| End bp | 1167344 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642751070 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_002121923 |
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| Protein GI | 195953633 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000366056 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACAT TAAAAATAGC TGTTTTAAAA GGTGATGGTA TAGGTCCTGA GATTGTGGAT
AGTGCTTTAG AAGTACTAGA TAGCTTAGCT TCAAAATATA ACTTCCAATA TGAAACAAAA
GAAGGCCTAA TAGGTGGTAT AGCTATAGAT AAAACAGGCA ATCCTCTTCC AGAAGAAACT
GTGCAAACAT GCAAAGAATC GGATGCAGTG CTGCTTGGGG CTGTAGGTGG GCCAAAGTGG
GACGATCTGC CAACAGACAA AAAACCAGAA AAAGGACTTC TTGGCATAAG AAAAGCCTTA
GACCTTTATG CAAACTTAAG ACCCGCCAAA GTTTTTGACG CTCTCATAGA AAGCTCACCT
TTAAAAGAAT CCGTGGTAAA AGGCACAGAT TTGATGGTGG TAAGAGAACT TTCTTCCGAT
GTGTATTACG GAGAGCCAAG AGGTATAACA ACACTTGAAA ACGGCGAAAG ATACGGCTTT
AACACAATGG GTTATAAAGA ATCAGAAATA AGAAGGGTGG TAAAAAAAGC TTTTGAGATA
GCAAGACAAA GAAGAAAAAA ACTCACCAGC GTTGATAAAG CAAATGTTTT GGAAGTCTCT
GGGCTTTGGA GAGATATAGT AAACGAAGAA CACGGAAATT ATCAGGATGT AGAATTAGAG
CATCTTTATG TGGATAACTG CGCTATGCAA CTTGTAAATA GACCTTATTC TTTTGATACC
ATAGTAACTG GCAACATCTT TGGAGATATA CTATCTGATG AAGCTGGTGT TATACAAGGA
AGTCTTGGTA TGCTTCCTTC AGCATCGTTA GGAGATAAAT ATGCTCTTTA CGAACCAATA
CACGGTTCTG CTCCTGATAT AGCAGGTAAA GGCATAGCAA ATCCTATAGC CACTATACTT
TCTGTGGCAA TGATGTTTAA ATATTCTTTT AAGATGGACG ATGTGGCAAA AGCTATAGAA
GATGCAGTTG ACAAAGCATT GGCTCAAGGG TATAGAACCC AAGATATATA TAGAGGAGAG
GGTATTAAGG TAAACACAAA AGAAATGACC AAGAAAGTTA TAGAAAACCT TTAG
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| Protein sequence | MKTLKIAVLK GDGIGPEIVD SALEVLDSLA SKYNFQYETK EGLIGGIAID KTGNPLPEET
VQTCKESDAV LLGAVGGPKW DDLPTDKKPE KGLLGIRKAL DLYANLRPAK VFDALIESSP
LKESVVKGTD LMVVRELSSD VYYGEPRGIT TLENGERYGF NTMGYKESEI RRVVKKAFEI
ARQRRKKLTS VDKANVLEVS GLWRDIVNEE HGNYQDVELE HLYVDNCAMQ LVNRPYSFDT
IVTGNIFGDI LSDEAGVIQG SLGMLPSASL GDKYALYEPI HGSAPDIAGK GIANPIATIL
SVAMMFKYSF KMDDVAKAIE DAVDKALAQG YRTQDIYRGE GIKVNTKEMT KKVIENL
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