| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1221 |
|---|
| Symbol | |
|---|
| ID | 6744038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | + |
|---|
| Start bp | 1131944 |
|---|
| End bp | 1133266 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642751030 |
|---|
| Product | peptidase C14 caspase catalytic subunit p20 |
|---|
| Protein accession | YP_002121884 |
|---|
| Protein GI | 195953594 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0510728 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAACA TAAAATCAAG GATTTTTAAA ATATTGTCTT TGTTAATCCT TAGTGTAGGG
CTTTCAAGAG CAGCTAGCAT GAATGATTAT GTAAATGAGA TAAACTCAGT TTATCATGAT
ATAGGACTTC AAAGCTTTGG AAAAGGCGCT TATGTACAAG TAGGTTCCAA CGGAAAAATA
GACCTAAAAG GAGATTATAA AACCTACAAA GATTTTGAGG AAGCCTATTA CATAGCAGAG
TCTATAGCAG GCGTATCAAA TGTGAATCCT GCTTTTAACG TAATAAATGC AAACATAATA
GAAAGGCCAT TAGAAAAATG CGTAGCTTAT TCTATGAAAA ATGAATACAG CAAATGTCCT
AATATTATAA GCTATAAAAG AGCATTATAT CCAACGTCTA AAAAATTTGC CATAGTAATA
GCAGTGGGGA AATTTGAAGG ACTACCACCC CAAAACACAT TGTATCCTGG CCCAGAAAAT
GATGCTAGAT TAGTGGCTAA AGAGTTAAGA AAAAAAGGTT TTAGAGTAGA AGAGCTTATT
GACAAAAACG CCACATATGA AAACGTAAAG AATGCCATAA GAAGCGCGAT AAACGCTTTG
CCAAATAACT CCACTTTGGT GATATATACA TCCACCCACG GTTCACCAAA AACACCTTCA
GGAGAAACGG GCTCTGTTTT ATACGACTCT GTAATAAGCA CTTACGAAAG CAACAACTGT
AACTATACAA ATACACAGCA AATAAACAAT GAAGGCTATA GAGATATAAC GGTAGTAAAT
GCACTAATAT CTGCTCAAAA AATGTGTTAT ATAGTACATA AATCTCTTAT CATAGCAACA
GATGTCCTGC CATTGATAGT AGAGTCTGGG AAAAATATAA ATCTTGTAGC TATAGAAGAC
ATATGTTACA GCGGTGCTTC TTTCAAAGGC GTTATACCAG ATGCTAAAAC TAACGATGTA
TATGCTCCTA CGAAATTAGT GGCTGAGAAT TTGGTAGGCC GTGATCCTTA TCCCATGATT
TTACTAACAT CGGCTTCTGG AGATCAACAT GCTCAACAAA GCCGAATAAA CATTAAAACT
GAAGAGCTTT GTAGCGACAA ATCAAATCCA GATTGCGTAG AGCATGGAGT ATTTACATAC
TACTATTTTA CAGGACTTCC AAGAAACAAC TATTATCTAT ACAAAACCTA CTATGCCGAG
TTCAACAAGA TAGTAGACGT ATCTAAAAAT ATAGTAAGTA GATCTATTGG AACTGGTGAA
AGTGACAAAC CACAGACGCC ACTTTTTATA TCAAATAAAA ATCTTACAGA TTTTGGACTT
TAG
|
|---|
| Protein sequence | MINIKSRIFK ILSLLILSVG LSRAASMNDY VNEINSVYHD IGLQSFGKGA YVQVGSNGKI
DLKGDYKTYK DFEEAYYIAE SIAGVSNVNP AFNVINANII ERPLEKCVAY SMKNEYSKCP
NIISYKRALY PTSKKFAIVI AVGKFEGLPP QNTLYPGPEN DARLVAKELR KKGFRVEELI
DKNATYENVK NAIRSAINAL PNNSTLVIYT STHGSPKTPS GETGSVLYDS VISTYESNNC
NYTNTQQINN EGYRDITVVN ALISAQKMCY IVHKSLIIAT DVLPLIVESG KNINLVAIED
ICYSGASFKG VIPDAKTNDV YAPTKLVAEN LVGRDPYPMI LLTSASGDQH AQQSRINIKT
EELCSDKSNP DCVEHGVFTY YYFTGLPRNN YYLYKTYYAE FNKIVDVSKN IVSRSIGTGE
SDKPQTPLFI SNKNLTDFGL
|
|---|
| |