Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_1200 |
Symbol | |
ID | 6744017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 1108836 |
End bp | 1109879 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642751009 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_002121863 |
Protein GI | 195953573 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 75 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATG ATATTTTTCT TAAAAGCCTA AAAAAAGAGC CTATAGCAAG GTATCCGGTT TGGCTAATGC GTCAAGCGGG TAGATATTTA CCAGAGTATA GAGCTATAAG GCAAAAATAC AAAAGTTTTT TGGATTTTTG TAAAAATGTA GAAGATGCAG CTATTGTATC CCTTCAGCCG GTGGATATAC TGGGTGTGGA TGCTGTAATC ATGTTCTCAG ATATCCTTGT ATTGTTAGAA CCAATGGGTA TAAAAGTCTC CTTTGAGGCT GGGGAAGGCC CTGTTTTGGA CCACAATTTT GATTTTAAAA ACCTAAAATC TCAGGGTATA TCTGGTGATC TATCTTATGT TTTTGAGCTT TTAAAAGTAT TAAAAGAAAA ATCTCCGGTG CCTGTGATAG GTTTTTGCGG AGCGCCTTTT ACGTTGGCCT CTTATGTGAT AGAAAAAGAA AGCTCAAGGG ATTTTACCAA AACAAAGGTA TTTATGTATG AAAACCAAAA AGATTTTCAC ATCTTGATGG AAAAGCTATC AGAAGCTCTT GTAGAGTATA TAGATCATCA AATTAAATCT GGGGCTGATG TAATCCAAAT TTTTGATTCT TGGAGTATGA GTTTATCGAG ATTTGCTTAC AAAGAATACG TGTATGATTA TAATGCTTTT ATTATAAAAT CTATAAAACA AAAACATCCC AACACCCCTA TCATATACTT TTTTAGAGGT TCTTCTTCTC ATATAGAGGA TGCTGTTGAT TTAGGCGCTG ACGCTTTGAG CGTGGATTGG AGTGTTTGCA TAAACGATGT CTGTAAACGC TATCCGGATT TGGTTTTCCA AGGCAATTTA GAACCTCAGA TACTTTTGTT AGACAAAGAA AATATAAGAA AGCATGTGGA AGAATTTGTG ATGTGCATAC CAAGGGATAC TGCTTTTGTG GTAAATCTAG GGCATGGTAT AACCCCAGAT GTATCTAAAG ATAATGTAAA ATATTTTGTA GAATGTGTGA AGGAGGTGTC TTATGGGAAA AGAAATCTCT TTAAAAAATG CTAA
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Protein sequence | MKNDIFLKSL KKEPIARYPV WLMRQAGRYL PEYRAIRQKY KSFLDFCKNV EDAAIVSLQP VDILGVDAVI MFSDILVLLE PMGIKVSFEA GEGPVLDHNF DFKNLKSQGI SGDLSYVFEL LKVLKEKSPV PVIGFCGAPF TLASYVIEKE SSRDFTKTKV FMYENQKDFH ILMEKLSEAL VEYIDHQIKS GADVIQIFDS WSMSLSRFAY KEYVYDYNAF IIKSIKQKHP NTPIIYFFRG SSSHIEDAVD LGADALSVDW SVCINDVCKR YPDLVFQGNL EPQILLLDKE NIRKHVEEFV MCIPRDTAFV VNLGHGITPD VSKDNVKYFV ECVKEVSYGK RNLFKKC
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