Gene HY04AAS1_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHY04AAS1_1200 
Symbol 
ID6744017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHydrogenobaculum sp. Y04AAS1 
KingdomBacteria 
Replicon accessionNC_011126 
Strand
Start bp1108836 
End bp1109879 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content35% 
IMG OID642751009 
Producturoporphyrinogen decarboxylase 
Protein accessionYP_002121863 
Protein GI195953573 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID[TIGR01464] uroporphyrinogen decarboxylase 


Plasmid Coverage information

Num covering plasmid clones75 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATG ATATTTTTCT TAAAAGCCTA AAAAAAGAGC CTATAGCAAG GTATCCGGTT 
TGGCTAATGC GTCAAGCGGG TAGATATTTA CCAGAGTATA GAGCTATAAG GCAAAAATAC
AAAAGTTTTT TGGATTTTTG TAAAAATGTA GAAGATGCAG CTATTGTATC CCTTCAGCCG
GTGGATATAC TGGGTGTGGA TGCTGTAATC ATGTTCTCAG ATATCCTTGT ATTGTTAGAA
CCAATGGGTA TAAAAGTCTC CTTTGAGGCT GGGGAAGGCC CTGTTTTGGA CCACAATTTT
GATTTTAAAA ACCTAAAATC TCAGGGTATA TCTGGTGATC TATCTTATGT TTTTGAGCTT
TTAAAAGTAT TAAAAGAAAA ATCTCCGGTG CCTGTGATAG GTTTTTGCGG AGCGCCTTTT
ACGTTGGCCT CTTATGTGAT AGAAAAAGAA AGCTCAAGGG ATTTTACCAA AACAAAGGTA
TTTATGTATG AAAACCAAAA AGATTTTCAC ATCTTGATGG AAAAGCTATC AGAAGCTCTT
GTAGAGTATA TAGATCATCA AATTAAATCT GGGGCTGATG TAATCCAAAT TTTTGATTCT
TGGAGTATGA GTTTATCGAG ATTTGCTTAC AAAGAATACG TGTATGATTA TAATGCTTTT
ATTATAAAAT CTATAAAACA AAAACATCCC AACACCCCTA TCATATACTT TTTTAGAGGT
TCTTCTTCTC ATATAGAGGA TGCTGTTGAT TTAGGCGCTG ACGCTTTGAG CGTGGATTGG
AGTGTTTGCA TAAACGATGT CTGTAAACGC TATCCGGATT TGGTTTTCCA AGGCAATTTA
GAACCTCAGA TACTTTTGTT AGACAAAGAA AATATAAGAA AGCATGTGGA AGAATTTGTG
ATGTGCATAC CAAGGGATAC TGCTTTTGTG GTAAATCTAG GGCATGGTAT AACCCCAGAT
GTATCTAAAG ATAATGTAAA ATATTTTGTA GAATGTGTGA AGGAGGTGTC TTATGGGAAA
AGAAATCTCT TTAAAAAATG CTAA
 
Protein sequence
MKNDIFLKSL KKEPIARYPV WLMRQAGRYL PEYRAIRQKY KSFLDFCKNV EDAAIVSLQP 
VDILGVDAVI MFSDILVLLE PMGIKVSFEA GEGPVLDHNF DFKNLKSQGI SGDLSYVFEL
LKVLKEKSPV PVIGFCGAPF TLASYVIEKE SSRDFTKTKV FMYENQKDFH ILMEKLSEAL
VEYIDHQIKS GADVIQIFDS WSMSLSRFAY KEYVYDYNAF IIKSIKQKHP NTPIIYFFRG
SSSHIEDAVD LGADALSVDW SVCINDVCKR YPDLVFQGNL EPQILLLDKE NIRKHVEEFV
MCIPRDTAFV VNLGHGITPD VSKDNVKYFV ECVKEVSYGK RNLFKKC