| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1178 |
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| Symbol | |
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| ID | 6743995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 1089450 |
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| End bp | 1090235 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642750987 |
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| Product | PDZ/DHR/GLGF domain protein |
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| Protein accession | YP_002121841 |
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| Protein GI | 195953551 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3031] Type II secretory pathway, component PulC |
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| TIGRFAM ID | [TIGR01713] general secretion pathway protein C |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.803619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAAGT CTTATGCAAC ATACAGCCTA ATAGTTAGTA TTTTGCTTAT ACTTACAAGT
ATTTTATCTT CTTATTACAA TATTAAAAGC CTAAAAATTG TATTGAATCA AGAAATGCCA
ACGATACCAT CTTCTTTTAA TGAAAATGAT CTAATGGAAG CTATAAGTAA ATTTGCACAC
CAAAAAATAA CTCCTCAAAC CACTAGCCCA AGCTCAAACA TGGAAGTACT TGCTATAGCC
TACAGTGAAA ATCCCGCTTA TTCTATGGTG CTTGTAAGCT CTAATTGTGG TAAAAAAGTG
CTTATGGTAG GAGATAGTTT TTGCGGTTTT ACAATAGAAG AGATAAAACC TTTTTATATA
ATAGCAAGCA ACGACGGCAA AACCCTTACT CTAAAACTTT CAAAAGGTGC TAAGATAAAC
AGTGCCAATA CACCAAGTGG TCTTCCTTCT TTGAAAGAAC TTTTAAACGG TAGCTTAAAT
CAAAATACTT ATACAGTAAA TAGAAACGAG CTTCTTGAAA TTACATCAAA CCCCTATAAG
ATGTTTAGCG ATATAGACCT TGTACCCACT CCAAAGGGTT TTATGTTTAA AAGCGTAAAA
CCAGGATCGC TTTTTGCCCA GATGGGTATA AGACCAGGTG ATATACTTCT TTCTATAAAC
AATGAAAGTC TAAACTCTCC AGAAGATGCT TTTAGAATAT TAGGTACATT AAGAAACAGC
CAAAGCTTCA GCGTAAAAAT CATAAGGGAC AACAAAGAGA TAACCCTTTA TTACAAAGTA
GAATGA
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| Protein sequence | MKKSYATYSL IVSILLILTS ILSSYYNIKS LKIVLNQEMP TIPSSFNEND LMEAISKFAH
QKITPQTTSP SSNMEVLAIA YSENPAYSMV LVSSNCGKKV LMVGDSFCGF TIEEIKPFYI
IASNDGKTLT LKLSKGAKIN SANTPSGLPS LKELLNGSLN QNTYTVNRNE LLEITSNPYK
MFSDIDLVPT PKGFMFKSVK PGSLFAQMGI RPGDILLSIN NESLNSPEDA FRILGTLRNS
QSFSVKIIRD NKEITLYYKV E
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