| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1165 |
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| Symbol | dapF |
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| ID | 6743982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 1078536 |
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| End bp | 1079369 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642750975 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_002121829 |
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| Protein GI | 195953539 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTATAA CAAAATATCA AGGTTCTGGC AACGATTTTA TTATCATAGA TAATAGGGAT
AATTTTGTTT ATAAAGAGAT AGAAAAGTTA GGTTTAAGTA TAAACGAATT TGTTAGAAAA
CTTTGTGAAC AGCATACATC AGTGGGTGCA GACGGTGTTA TACTTATAGA AAAAGCCAGA
AATACTAAAA ATCATTTTAG CTGGGCGTTT TTCAACGCCG ATGGTTCGGC AGCTGAGATG
TGTGGCAACG GTTCTCGTTG CGCTGCAAGA TTTGCCTACG AGAAAGATAT TGCTCCAAAG
GATATTGTCT TTGAAACAAT AGCTGGCGAG ATAGAAGCTC ACATAATGGA TTCAAAAAGG
GTAAAAGTGC AACTTACCCC TTATCATTCA CATCAAAAGA ATATAGAAAT CAAAACTGAG
TATGGCACTT TCAAAGGTCA TTTTGTCAAT ACTGGGGTGC CACATTTTGT TATATTTGTG
GATGAAGATG AACTTGATAA CTTAGATGTG GAAAAAGTAG GTAGAGCCAT AAGATATCAT
GAGTATTTTG CTCCAAAAGG AACAAATGTA AATTTTGTGG CAAAAACAAA AAACGGCAGT
TTTAGAATAA GAACTTACGA AAGGGGCGTT GAAGGTGAAA CCCTTGCCTG TGGGACCGGT
AGCGCAGCTT GTGGTATAAA CGCATATCTT CTTGGTTTAT CGGCTTCTAA CATAGTAGAC
ATCATCACCA AATCCGGTGA GCTCTTAAAA ATAACCATAG AGAATGATAA GGTATTTTTA
GAAGGTCCCA CTACAAAAGT ATTTGAAGGC ATGCTCTCTT ACGAGATCTT CTAA
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| Protein sequence | MLITKYQGSG NDFIIIDNRD NFVYKEIEKL GLSINEFVRK LCEQHTSVGA DGVILIEKAR
NTKNHFSWAF FNADGSAAEM CGNGSRCAAR FAYEKDIAPK DIVFETIAGE IEAHIMDSKR
VKVQLTPYHS HQKNIEIKTE YGTFKGHFVN TGVPHFVIFV DEDELDNLDV EKVGRAIRYH
EYFAPKGTNV NFVAKTKNGS FRIRTYERGV EGETLACGTG SAACGINAYL LGLSASNIVD
IITKSGELLK ITIENDKVFL EGPTTKVFEG MLSYEIF
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