Gene HY04AAS1_1161 details

Gene Information

• Locus tag: HY04AAS1_1161
• ID: 6743978
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Hydrogenobaculum sp. Y04AAS1
• Kingdom: Bacteria
• Replicon accession: NC_011126
• Strand: +
• Start bp: 1075163
• End bp: 1075633
• Gene Length: 471 bp
• Protein Length: 156 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 642750971
• Product: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_002121825
• Protein GI: 195953535
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.0148127
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATAGGA TAGGCATAGG TCAAGACGCT CATTATTTTG AAAAAGGGAA AAAGCTATAT 
TTAGGGGGTG AAGAGTTTGA TATAGGATAT GGCTTAAAAG GGCATTCGGA TGGTGATGCT 
CTTTTGCATG CAATAACAGA TGCTATTTTA GGGGCGTTGG CAAAAACCGA TATAGGCACT 
CTTTTTCCCG ATAAAAGCAA AGAAAACAAA AATAGAAACA GCGTAGACTT TCTAAATAAA 
GCTTTAGAGA TTATGTACGA CATGGATTAT TCAATAGTTA ATTTAGACTG CAACATAATA 
GCAGATAAAC CAAACATATC AAGCGTTAGA GATAAAATAA TAGAAAGTCT ATCGAGGCTT 
TTAAGTATAC CAAAAGATAA TATATCTATA AAAGCCAAAA CTAAAGAAGG TTACAACAAA 
GAAGATAGCT TAGAGGTAGT ATGCATAGCG CTTTTGCAGA AAATGATATA G 

 

Protein sequence

MYRIGIGQDA HYFEKGKKLY LGGEEFDIGY GLKGHSDGDA LLHAITDAIL GALAKTDIGT 
LFPDKSKENK NRNSVDFLNK ALEIMYDMDY SIVNLDCNII ADKPNISSVR DKIIESLSRL 
LSIPKDNISI KAKTKEGYNK EDSLEVVCIA LLQKMI