| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1157 |
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| Symbol | |
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| ID | 6743974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 1070803 |
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| End bp | 1072311 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642750967 |
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| Product | transcriptional regulator, NifA subfamily, Fis Family |
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| Protein accession | YP_002121821 |
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| Protein GI | 195953531 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATA AGATAAAGCT TGAAAATATA GATGTATCGC TTTTGACCTC TGTAAGCAAA
GCTCTTTCTC AAAAAGATTT CGACAAGGCT TTAAGGGATA TTTTAAAAAT ATTTTACTCT
TTTTGGGGTG TGGAATACTC TTACATAGCT TTTTATGATA AAAGCACAAA AACTATAAAA
ATAAGAGAAG CCTTTGGTTT TAATCAAAGT GTAAAGAAGA TACTTTTTGA ATCCGGAAAG
GGGATAGTAG GAAATATATT TAAAAATAGT ATACCTGTTG TAATAAAAGA TCCAAAACAC
GACAAGGCTT TTTTGAACAA AACAAAAATC TTAGACAAGA TAAAAAATGA AGCTTTTATA
GGGGTTCCCA TAAGATCAGA GGATAGAACC ATAGGGGTTT TTTGTCTTTT TAAAGACCTA
AACAAACACG AAGAACTAAC GCGTATTGTG GATATTATGC TTGTAGTAAG TGCTATGATA
GGTATGTCTT ACAAACTTTT TGGGATTTTA CAAGAAGAAA AAGCCTCTTG GGAAGAGCAA
AGGCAACTTT TGGCAAAAGA GTTTTCAGAT ACTTTTAGCA TAGAAGGATT TGTTGGAAAA
TCAGAAGCTA TAATTACATT AAAAGATACT ATCCAAAAAA TAGCGATGAC AGATAGCACA
GTACTTTTGT TGGGAGAAAG CGGAGTGGGT AAAACGCTCA TAGCAAAGGC GATACACACT
TTGAGTGAAA GAAAAGATAA ACCTTTTATA TCTGTAAACT GCGCAGCAAT ACCAGAAACG
CTTCTTGAAG CAGAGTTGTT TGGGTATGAA AAAGGGGCTT TTACAGGGGC TGTTCATTCT
AAAAAAGGTA AATTTGAGCT GGCAAACGGA GGTACAATTT TTTTAGATGA GATAGGTGAG
CTCCCTCTTC AATCTCAATC AAAACTGTTA AGGGTTATAC AGGAAAAGGA ATTAGAAAAA
CTTGGGGCTG AAAAGAGTAT ATTTGTAAAT GTGAGAGTAA TAGCATCCAC CAACAAAGAT
TTAGCATCTA TGGTGGCAAG AGGAGAGTTT AGAGAGGATT TGTATTACAG GTTAAACGTA
ATACCTATAA GAGTACCGGC TCTAAGAGAA AGAAAAGAAG ATATACCCCT TTTGGTAAAA
CATTTCTTAG ATAAATTTAA CAAGCATTAT AAAAAACATA TAAATATAGA AAAAGAAGCT
ATGGAGGCTC TTGTGAATTA CAATTGGCCT GGCAACATAA GAGAGCTTGA AAACCTTATA
GAGCGTCTTG TGGTTATAAA CAACAAAGAC ATTACAAAAG AAGACGTTTT GCTGGCTACC
AAGATAAATT CTAATAAACT ACAAACTGAC ATACCAAGCA TTATAGAATC TACCGAAAAA
GAGGCTATCA AAAAAGCTTT GGAAAAATGT GGTTATGTGA AGTCAAAAGC TGCAAAAATC
CTAGGCCTCA CATTAAGACA GTTAGACTAC AGAATAAAAA AATACAACAT ACCTATAGAA
AGGCTTTGA
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| Protein sequence | MSNKIKLENI DVSLLTSVSK ALSQKDFDKA LRDILKIFYS FWGVEYSYIA FYDKSTKTIK
IREAFGFNQS VKKILFESGK GIVGNIFKNS IPVVIKDPKH DKAFLNKTKI LDKIKNEAFI
GVPIRSEDRT IGVFCLFKDL NKHEELTRIV DIMLVVSAMI GMSYKLFGIL QEEKASWEEQ
RQLLAKEFSD TFSIEGFVGK SEAIITLKDT IQKIAMTDST VLLLGESGVG KTLIAKAIHT
LSERKDKPFI SVNCAAIPET LLEAELFGYE KGAFTGAVHS KKGKFELANG GTIFLDEIGE
LPLQSQSKLL RVIQEKELEK LGAEKSIFVN VRVIASTNKD LASMVARGEF REDLYYRLNV
IPIRVPALRE RKEDIPLLVK HFLDKFNKHY KKHINIEKEA MEALVNYNWP GNIRELENLI
ERLVVINNKD ITKEDVLLAT KINSNKLQTD IPSIIESTEK EAIKKALEKC GYVKSKAAKI
LGLTLRQLDY RIKKYNIPIE RL
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