| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1153 |
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| Symbol | |
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| ID | 6743970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 1066172 |
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| End bp | 1067230 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642750963 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002121817 |
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| Protein GI | 195953527 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAAA TAACAATCAC CAGACATCTA AGGTTAGAGT TCCTGGGTCA CATTTTTAAA
AGTAGAGAAG AATACGGTTT AGTGGTGTTT GGTTTTTACA GTATTTTATT CTTTGGTATA
GGGTTTTTAA TAGGAGTATT TCTAAATACC GTTTTTAAAA GCTTTAAAAC CACCAACAAA
ATAAGCATAA GCCCGTTTCT CATAGGACTT TGGAGCACTT TCTTAGGAGC TTATCTATCT
TCTGATTATC TTTACATCAC AAAAAAAGCT CATCATGTAA TAGATAGGAC TATACTATTT
GGTCTTATTT TTATCGGTTT TTATATACTT TCAAACATTA TAGGAGAGAT AATAGCCTTA
TACATAAAGT CTAAAACCAA TGAAGTACCT TTTTCTATGT TAAAAGCTTC AATAGTGGCA
TTTGTTTCCA TTATCGGGCT TTTTATAGCT TTTCAAAGTA TAGGGCTTTC CATAACCCCA
CTCATTACAA CCTTAGGAGT TGGCACCGTA GTAATAGGTC TTGCTCTTCA AGATACCCTA
TCAAACTTCT TATCTGGGTT TTATATACTA GTTAGTAAAA ATATAAGAGT AGGGGATTAC
ATAAAGTTTG ATGTGTACGA GGGATATGTA GAAGATATAT ATTGGCGTAC CACCCACATA
AGAACTCTTT CTGGAAACGT TATAGTGGTA CCAAACTCAA AACTCACATC TTCTGTAATT
ACAAACTATC ACCTTCCATA TGAGAACATG GCAGTGGTGT TTTCTTTTTC TGTAGGTTAT
AAAGAAGATC TTGAAAGAGT AGAAAAGCTT CTTATAGAAA CAGCAAAAGA GGTTGTAAAC
AAAGTAGAGG GTGCAGACAA AACCTATGAG CCAGTCGTAA GATACAGGTC TTTTGGTAGT
TCTGGCATAG ATTTAAGCCT AGTTGTAAAA GCAAAAGAAT TCCTAAACCA ATACCTTATA
ATTCATGAGC TTATAAAAGC CATAAAAAAG CGATTTGAGG AAGAAAACAT AGAAATACCA
TATCAGACGA TAAATGTAAT AATAAAAAAC GAAAGTTGA
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| Protein sequence | MDKITITRHL RLEFLGHIFK SREEYGLVVF GFYSILFFGI GFLIGVFLNT VFKSFKTTNK
ISISPFLIGL WSTFLGAYLS SDYLYITKKA HHVIDRTILF GLIFIGFYIL SNIIGEIIAL
YIKSKTNEVP FSMLKASIVA FVSIIGLFIA FQSIGLSITP LITTLGVGTV VIGLALQDTL
SNFLSGFYIL VSKNIRVGDY IKFDVYEGYV EDIYWRTTHI RTLSGNVIVV PNSKLTSSVI
TNYHLPYENM AVVFSFSVGY KEDLERVEKL LIETAKEVVN KVEGADKTYE PVVRYRSFGS
SGIDLSLVVK AKEFLNQYLI IHELIKAIKK RFEEENIEIP YQTINVIIKN ES
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