Gene HY04AAS1_1123 details

Gene Information

• Locus tag: HY04AAS1_1123
• ID: 6743939
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Hydrogenobaculum sp. Y04AAS1
• Kingdom: Bacteria
• Replicon accession: NC_011126
• Strand: +
• Start bp: 1041346
• End bp: 1042014
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 642750932
• Product: Sel1 domain protein repeat-containing protein
• Protein accession: YP_002121787
• Protein GI: 195953497
• COG category: [R] General function prediction only
• COG ID: [COG0790] FOG: TPR repeat, SEL1 subfamily

Plasmid Coverage information

• Num covering plasmid clones: 49
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAGC CTTACATTAT AGGAGGAACA ATATTATTAG TTTTAATTGG TGGTTTTGTT 
TTTAACAGAT ACGTGTATAG TAAAATAGAA TATAAAAAAG GTCTTTCTTA TTATAAAAAT 
AAAAACTACC AAAAAGCATT ACCTTTATTT AAATACGCTG CGAATCAAGG ATATGCGCCA 
GCAGAAGAGA AGCTTGGATA TATGTATGGA CGCGGTCGGG GTGTACCACA GGATTACTAT 
GAAGCTGTAC ATTGGTTTAA AAAATCTGCT AAACAAGGAT ATGCAAAAGG AGAATTTTAT 
CTTGGAACGA TGTACCTAGC TGGTTTAGAA GTAGCACATG ATCCCAATAA AGGTGTATAT 
TGGTTAAAAA AATCTGCTGA ACAAGGAGAT GCAGAAGCAG AAGATTTTCT TGGAATGATT 
TACCTAGGTG GTTCAGGAGT ACCACACGAT TATAAAAAAG CTGCATATTG GTTTAAAAAA 
GCTGCACATC AAGGTGATGC TTTAGGAGAA TATCTTCTTG GTCGTATGTA CCAACATGGT 
TTAGGGGTAC CAAAAGATCA TAAAAAAGCT TCATATTGGA TTAAGAAAGC AAAAAAACAA 
GGACATGCAA AAAGAAAATA TTATCTTGAT GAACTTCGTA AATTAAAGCA CCTATTAGGT 
GGTTATTGA 

 

Protein sequence

MKKPYIIGGT ILLVLIGGFV FNRYVYSKIE YKKGLSYYKN KNYQKALPLF KYAANQGYAP 
AEEKLGYMYG RGRGVPQDYY EAVHWFKKSA KQGYAKGEFY LGTMYLAGLE VAHDPNKGVY 
WLKKSAEQGD AEAEDFLGMI YLGGSGVPHD YKKAAYWFKK AAHQGDALGE YLLGRMYQHG 
LGVPKDHKKA SYWIKKAKKQ GHAKRKYYLD ELRKLKHLLG GY