Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_1116 |
Symbol | |
ID | 6743932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 1032290 |
End bp | 1033792 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642750925 |
Product | protein-export membrane protein SecD |
Protein accession | YP_002121780 |
Protein GI | 195953490 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAAGA ATATTTTTAT CAATATTCTT ATAGGGACTT TTATCATAAT AGGTTCTTTG CTGGTGGTGG CTTTTAAGCC AGTAAACCTT GGTCTTGACT TGAAAGGGGG CATAAGCATG GTCTTGGCTC CCGATATAGA CAAAGTTATA AAAGAAGAGT ATGAAAACAC AGCCTCTGAT ATATCAAAAC TTTTTTTGAA AAATCATATA AACGTCTTAG ATGTAACACC TTCTCAAGAT GGTATATACA TAGATTTATT AAACGCTTCA GATTACAGCA AAGTTTATGA GCTTTTGACA AAATACTACA AAAATAGAAT AGATATTTCC AAAGTATCAC CTCTTAAAGT TAAAGTTAGA TTTAGCTCTA TTTATCTTAG TCAGATAAAA GAAAACGTTA TCACTCAAAC GGTGGAAGTC CTAAGAAGAA GAGTAGACCA ACTTGGCGTA GTGCAACCTG TAATTACAAG GCTTGGCAAT TCTAAAGTTA TGGTGGAGCT ACCCGGTGTT ATGGATTTAG AAAGGGCTAA AAAAGTCCTT GGGAAAACCG CTCAGCTTGA GCTCATGGAA GTGGTGGACG CATCAGCTTC TTTAGATGCT TTACAAAAAG AATTAAAACC AGATGAAAAG ATATTGCCAT CAAAAGATGG ACATGAATGG TATTTAGTTA AGAAAAAACC TATAATAACA GGGGCTGATT TAAAAACCGC TTACGAGAGC ACCGATAGCT TTAACAACCC TGCTGTTAGC TTTGAACTAA ATTCAAAAGG AGCTGAAATA TTTGGTAATT TTACCCAGAG CCATATAGAT AAAAGGCTTG CTATAGTCCT TGACAACAGA GTTATGTCTG CTCCAGTTAT TCGTTCAAGA ATATCAGATC AAGGTCAGAT AACTGGTAAT TTTACACCAG ATCAAGTAAG GGACTTGGCC GCTATTTTAA GAGCCGGTGC ATTGCCTACA ACGCTTCACA TACTCCAAGA TGCTGTGGTA GGGCCCACTT TGGGAAAAGC GGCTATAAAA CAGAGTATCT ATGCTGGTTT AGCGTCGTTT TTGTTTGTGG TGTTTTTGAT AATAACAAGG TATAAGACAG CAGGGGTCAC AGCCACTATA GCTATAATAA TGAATGGGCT TCTTCTTTGG GCTGGTCTTG TGCTTTTAGG AGCTACACTT ACATTGCCAG GTATTGCAGG TATCATACTA AATATGGGTA TAGCGGTAGA CTCAAACGTT CTTATTTTTG AGCGTATAAA AGAAGAAATA GCAAGGGGCA ACACCCTAAG GAAAGCCGTA GAATACGGTT ATAAGAGAGT GCTTAGTGCC GTTTACGATA CACACGCCAC ACTTCTGGTG GCAGCTTTGA TACTTTTTCA ATTTAGTAGC GGTCCAGTGA AGGGCTTTGC CACCACACTT ACTATTGGTA CCATAGCATC GTTTTTGTCA AATGTTTATT ATTCAAAAGT GATGATAGAC ATCTTAGCGA AACTAAGAAT GCTTAAGATA TGA
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Protein sequence | MPKNIFINIL IGTFIIIGSL LVVAFKPVNL GLDLKGGISM VLAPDIDKVI KEEYENTASD ISKLFLKNHI NVLDVTPSQD GIYIDLLNAS DYSKVYELLT KYYKNRIDIS KVSPLKVKVR FSSIYLSQIK ENVITQTVEV LRRRVDQLGV VQPVITRLGN SKVMVELPGV MDLERAKKVL GKTAQLELME VVDASASLDA LQKELKPDEK ILPSKDGHEW YLVKKKPIIT GADLKTAYES TDSFNNPAVS FELNSKGAEI FGNFTQSHID KRLAIVLDNR VMSAPVIRSR ISDQGQITGN FTPDQVRDLA AILRAGALPT TLHILQDAVV GPTLGKAAIK QSIYAGLASF LFVVFLIITR YKTAGVTATI AIIMNGLLLW AGLVLLGATL TLPGIAGIIL NMGIAVDSNV LIFERIKEEI ARGNTLRKAV EYGYKRVLSA VYDTHATLLV AALILFQFSS GPVKGFATTL TIGTIASFLS NVYYSKVMID ILAKLRMLKI
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