| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1090 |
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| Symbol | |
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| ID | 6743905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 1012323 |
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| End bp | 1013465 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642750898 |
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| Product | nuclease SbcCD, D subunit |
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| Protein accession | YP_002121754 |
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| Protein GI | 195953464 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAGT TTTTACACAT AGGAGATATA CATGCTGGCA AAACGCTTCA CAGCAGATCA
AGAAACGATG ATGCAGAATA CGCCATATCT CAAGTGATAG ATTTTGTAAA AAAAGAGCCT
GTAGATTTCA TACTTATGGC AGGCGATATC TTTGATCAAT ACACTCCGGA TGCAGAAGCC
ACAAAAATCA TATTTGATTT TATGGTAAGT GAGTTAAACG CTTTAAAGAT TCCAGTAGTC
ATGATCACCG GAAACCACGA TGGACATAGT TTTTTTGAAG GTTACAAGAC TCTTGCCAAA
TACGCCAACA TGCATTTGTT TGTAAAACCT TCTACAAAAG ATTACATTAT TACAATAAAA
GATACCAACA TAATATGTGT ACCTTATGTT TTTACTAAGA TCTTAGATAA AACCTGGGAA
GATAACGCTG CCTCAGAATA TGCTCATAAA GTAGAAAATT TTATAAATGC ACTCATTTCA
AAAGCCCCAA GAAATACCTT TAATATATTG CTTTCCCATA TGATGGTAAA AAGTGCAAAA
CCAACAAAAT CAGAAAGAGA AGCTTCCATA GGGGAGTATT ATGCAATAAA TTTAGACAAC
ATAAACAATC TTAAAAACTT GGACTACGTT GCCTTAGGGC ATGTGCATAA ATATCAAAAA
ATACCCACCA CTACAGATAC CTATTACACA GGTTCTTGTT TTCAAATAGA TTTTAACGAA
GAAGGGCAAG AAAAATACTT CAACTTTGTA ATTTTAGAAC AACAATCCAC CAACAAAGTA
GAAAAGATAA AATTAGATAT AAAAAACCAG CTTAAAACTC TAAAAGTTAA TGCCAAAAGC
TTAAATATAA AAGATATAGA AAACGTAAAA GGATACGTAA GGGTAATCAT AGACGATACC
ATCGAAAATA CTAGGCTTTT AGAATCAAAA TTAACATCAG AACATATAGC GGGCAAAATC
TTAGAAATAA GAAGAAACGT TTTTGAAAAA CCAGACATAG AAGTAGATTT AAACAAAATA
AGAAATAACC TTGTGGATTT TTACGAAGAA TATTACAAGG CAAAATACCG CGAAGATTTG
CCAGAGGATT TAAAGAAAGC ATTCGTAGAA CTTCAATACA AAGTAGAGCA TACAGAAGAC
TAG
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| Protein sequence | MIKFLHIGDI HAGKTLHSRS RNDDAEYAIS QVIDFVKKEP VDFILMAGDI FDQYTPDAEA
TKIIFDFMVS ELNALKIPVV MITGNHDGHS FFEGYKTLAK YANMHLFVKP STKDYIITIK
DTNIICVPYV FTKILDKTWE DNAASEYAHK VENFINALIS KAPRNTFNIL LSHMMVKSAK
PTKSEREASI GEYYAINLDN INNLKNLDYV ALGHVHKYQK IPTTTDTYYT GSCFQIDFNE
EGQEKYFNFV ILEQQSTNKV EKIKLDIKNQ LKTLKVNAKS LNIKDIENVK GYVRVIIDDT
IENTRLLESK LTSEHIAGKI LEIRRNVFEK PDIEVDLNKI RNNLVDFYEE YYKAKYREDL
PEDLKKAFVE LQYKVEHTED
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