Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_1069 |
Symbol | |
ID | 6743884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 996894 |
End bp | 998291 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642750877 |
Product | glutamate synthase (NADPH), homotetrameric |
Protein accession | YP_002121733 |
Protein GI | 195953443 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000858078 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TTAGGTATTA CGATAGAAAC CAAGAAGTCT TAATGCCAGT GGAGAAGCGT ACAAAAACCT TTGAAGAGTA TGCCCTTGGC TATACAATAA ATTTAGCTAT AGATGAGGCA AGGCGTTGTA TACTTTGCAA AGATGCAGAT AAAAGATGTA TTAAAGGTTG TCCTATAAAT GTAGACATAC CTGGTTTTAT ATCGAAGATA GCGGAAGGTA ACATATTGGA AGCTTACAAG ATAATCACTC AAACGGATAT ATTTCCCTCA ATATGTGGAA GGGTATGTCC TCAAGAAAGG CAATGCGAAG GTGCTTGCAT ATTGTACTTT GATACGGTAA GAAACAAGAG AAACAAGGGC CTTCCTGTTA ACATAGGGGC TTTAGAAAAG TTTGTAGGAG ATTTTGTAAG GATATCTGGC ATAGAACCTT CAGTAGATAT AGAAGAAAAG AAAGGATACA AAGTTGCGAT TGTGGGCTCA GGTCCAGCAT CATTAGGATG TGCTTATGAA CTTGCTAGAA AAGGTATAGA TGTTGAGGTT TACGAAGCGC TTCCTAAGCT TGGTGGTGTG ATGTTTTACG GTATTCCAAA TGCAAGGCTT GATAAATCCA TACTAGAATA CGAAATAAAC AAACTCAAAA AAATGGGCGT AACATTCCAT ACTGGCATAG TAGTAGGAAG AAGTATGTCC TTCAAAGAAT TAAAAGAAAA CTTTGATGCG GTGTTTATAG GTGTAGGTGC TGGTAGGGGA AATCTTGGTA TAAAAGGAGA CAACCTTATA AATGTATATT CTGCAATAGA ATTTCTCATG AATATAGCTT TAGGTTGTCA AATGGCCGAT ATAAAAAAAG TAGCCATAAT AGGTGGTGGA TTTACCGCTG TGGATTGTGC TATAAGTGCC ATAAGGTTTG GTATAGAAAC CCATGTGGTT TATAGAAGAA CCAGAGAAAC CTCATCAGCT AGAGACGAAG AGTGGGATCA CATTCAAGAA GAAGGTGCCA TAATACATTG GCTTACACAA CCAAAAGAAA TAATAGGAGA TGAAAACGGT TATACAAGAG GTCTTCTTTG TGTAAGAATG GAGCTTGGCG AGCCAGACGA GTCAGGAAGA CCTAGACCAG TTGAGATACC AAACTCAGAG TTTGTTATAG ACTGTGATGC TGTGGTGTTG GCTATAGGTC AAAAACCGAA CCCTATAGCC TTTGAAGAAC TAAACTTAAA GACTACAAAA TGGGGTACTC TTGAAGTGGA CCAAAATTAT ATGTGTTCTA TTGATGGTAT ATTTGCATCT GGGGATGTGG TAAACGGCGG TGATACTGTA GTAAGAGCTT TGAAAGAGGG GAAAGAAGCG GCTAAGCATA TTTACGATTA TCTTATTAAT AAATCCAGGA GGTCATAG
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Protein sequence | MKKIRYYDRN QEVLMPVEKR TKTFEEYALG YTINLAIDEA RRCILCKDAD KRCIKGCPIN VDIPGFISKI AEGNILEAYK IITQTDIFPS ICGRVCPQER QCEGACILYF DTVRNKRNKG LPVNIGALEK FVGDFVRISG IEPSVDIEEK KGYKVAIVGS GPASLGCAYE LARKGIDVEV YEALPKLGGV MFYGIPNARL DKSILEYEIN KLKKMGVTFH TGIVVGRSMS FKELKENFDA VFIGVGAGRG NLGIKGDNLI NVYSAIEFLM NIALGCQMAD IKKVAIIGGG FTAVDCAISA IRFGIETHVV YRRTRETSSA RDEEWDHIQE EGAIIHWLTQ PKEIIGDENG YTRGLLCVRM ELGEPDESGR PRPVEIPNSE FVIDCDAVVL AIGQKPNPIA FEELNLKTTK WGTLEVDQNY MCSIDGIFAS GDVVNGGDTV VRALKEGKEA AKHIYDYLIN KSRRS
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