| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1065 |
|---|
| Symbol | |
|---|
| ID | 6743880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 992994 |
|---|
| End bp | 994673 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642750873 |
|---|
| Product | alpha-glucan phosphorylase |
|---|
| Protein accession | YP_002121729 |
|---|
| Protein GI | 195953439 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0058] Glucan phosphorylase |
|---|
| TIGRFAM ID | [TIGR02094] alpha-glucan phosphorylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00035073 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGCTT ATTTTGTAAT GGAATGCGGC GTAGAGCCAT ATATACCCAC TTACAGTGGG
GGTTTGGGAG TATTGGCTGG TGATACGCTT CAAAGCCTTG CGGATTTAAA AGTGCCCTCT
GTAGGTGTTA CTATACTCTG GAGAAAGGGT TATATATCTC AGCATCTTAC AGCTCATGGA
GCTCAAACAG ATTTCCCGCA AGCTTGGGAC CCATCAAAAT ATTTAAAGCC TTTAGATATT
AAAATCAAAA TACCTATTAA CGGTCAAGAT ATATATGTGA CAGCTTGGAA ATACGATATG
ATGGGTATAA ATGGTCATAT AGTACCAGTA CTATTTTTAG ATACAAACTT GAAAGAAAAC
CAACCAGATA TAAGACAAAT ATTTGACAGG CTTTATCTTG CCCAAGGGAA AGATAGGATG
CTTCAAGAGA TTATATTTGG TATAGGGGGT TATGAGCTTT TAAAAGCTTT GAGTTATAAA
ATAATGGTAT ACCACATAAA CGAAAGTCAC TCAGCATTTC TAACGGTGGG TCTTTTGAGA
GATTTGCAAG ACATAGAAAA AGTTAGGGAT AGGGTAGTTT TTGTAACTCA TACACCTGTG
GCAGCTGCTT TTGACAAGTT TCCAATAGAA GATGTGAAAA CCTATTTAAA AGATTATATC
AAAGATGCAA ATATGGAAGA TCTTTTTGAT CACGATCAAG AGTTTAACCT ATCTTGGGTA
TCTTTAAAAG CTTCAAGAAC TGTGGCTGCT GTATCAAAAA AACACAAATA CGTATCTGAA
AGTATTTTTG AAGGGCATAA GCTAGAATAT GTGACAAACG GTGTGCATCA TATGAGATGG
GTATCACCTC ATCATAAAAA GCTTTACACA GAATTTATAA GAGGTTGGGA AGAAGACCCT
TCCTTACTAA GACAGATAGT AAATGTACCA GATCAGATAT TTATACAAGC CCATCAAAAG
GCAAAAGACG ATCTTATAGA TTTGGTAAAC TCTCAAACGG ATGCTTCATT TTCTAGAGAT
TGGTTTACTA TAGGGGGAGC AAGGCGTATA ACTGCCTATA AAAGAAATCA TATTATATTA
AAAGATATTG ACTGGCTCAT AGATATAGCT AACGATTTTA ACGGTCTTCA AATAGTATTT
TCTGGTAAAG CTCATCCACT TGACGGAGAA GGCAAAGCTA TCATAAAAGA GATATTTGAT
GCAAAAGATT ATGCAAAATC CAAAACCAAC AAGCTAAAAA TAGCTTTTAT AGAAAATTAC
GACATGTATA AAGCTAAGAT TATTATATCC GGCGTAGATA TATGGTTAAA CACTCCACAA
AGACCTTTAG AGGCTTCTGG TACAAGTGGA ATGAAAGCAG CTTTAAATGG TGTTCCCAAT
TTCTCTGTAT TGGATGGATG GTGGATAGAA GGCTGTATGG AAAACATAAA CGGCTGGTCC
ATAGGTAAAA AAACCTCTTG GGAAGATATA GCTTTAGAAC CAGAATGGGA TAAAGAAGAG
ATACACGATC TTTACAACAA GCTTAGATAT ATAATATTGC CCACTTACTA CAACAGCTTT
GGGAAATATA TAAACGTTAT GAAAATGGCT GTAGCCACAA GTGGGACATA TTTTAATACA
AATAGGATGG TAATGGAATA TATAACAAAG CTTTATCTAA AGAACACGTT GGCGGTGTGA
|
|---|
| Protein sequence | MIAYFVMECG VEPYIPTYSG GLGVLAGDTL QSLADLKVPS VGVTILWRKG YISQHLTAHG
AQTDFPQAWD PSKYLKPLDI KIKIPINGQD IYVTAWKYDM MGINGHIVPV LFLDTNLKEN
QPDIRQIFDR LYLAQGKDRM LQEIIFGIGG YELLKALSYK IMVYHINESH SAFLTVGLLR
DLQDIEKVRD RVVFVTHTPV AAAFDKFPIE DVKTYLKDYI KDANMEDLFD HDQEFNLSWV
SLKASRTVAA VSKKHKYVSE SIFEGHKLEY VTNGVHHMRW VSPHHKKLYT EFIRGWEEDP
SLLRQIVNVP DQIFIQAHQK AKDDLIDLVN SQTDASFSRD WFTIGGARRI TAYKRNHIIL
KDIDWLIDIA NDFNGLQIVF SGKAHPLDGE GKAIIKEIFD AKDYAKSKTN KLKIAFIENY
DMYKAKIIIS GVDIWLNTPQ RPLEASGTSG MKAALNGVPN FSVLDGWWIE GCMENINGWS
IGKKTSWEDI ALEPEWDKEE IHDLYNKLRY IILPTYYNSF GKYINVMKMA VATSGTYFNT
NRMVMEYITK LYLKNTLAV
|
|---|
| |