| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1044 |
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| Symbol | rplT |
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| ID | 6743859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 976467 |
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| End bp | 976817 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642750852 |
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| Product | 50S ribosomal protein L20 |
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| Protein accession | YP_002121708 |
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| Protein GI | 195953418 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0292] Ribosomal protein L20 |
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| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000000215802 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAGTAA AAGGTCGCTC TTCCAAAAAG TTTAGGAAGA AAGTTTTAAA ATTAGCAAAG
GGATATAGAG GCCAAAAGAG TAGAGTTTAC AGAAAAGCTA AGGAAGCTGT TATAAGAGCA
CTGAAATATC AATACAGGGA TAGACGCCAG CGCAAAAGAC AGTTTAGAGC GCTTTGGATA
GCTCGTATAA ATGCCGCTTG CAGAGCCAAC GGCATGACAT ACAGCAAGTT TATAAACGGT
CTTAAAAAAG CTGGTATAAA TCTAAATAGA AAATCTCTAT CCCAAATAGC AATCCTTGAC
CCTCAGGCTT TTAAAGAGCT TATAGAAAAA GCAAGACAGC ATGTTGCTTG A
|
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| Protein sequence | MRVKGRSSKK FRKKVLKLAK GYRGQKSRVY RKAKEAVIRA LKYQYRDRRQ RKRQFRALWI
ARINAACRAN GMTYSKFING LKKAGINLNR KSLSQIAILD PQAFKELIEK ARQHVA
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