Gene HY04AAS1_1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHY04AAS1_1039 
Symbol 
ID6743854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHydrogenobaculum sp. Y04AAS1 
KingdomBacteria 
Replicon accessionNC_011126 
Strand- 
Start bp973117 
End bp973605 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content33% 
IMG OID642750847 
ProductShikimate kinase 
Protein accessionYP_002121703 
Protein GI195953413 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0118821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTAGTG GCAAAACATC TGTAGGCAAT ATATTGTCTT CAATGTTAAA CTTTGCCTTT 
ATAGATGTAG ATAAGGAGAT AGAAAACCGC CTTAATATGA CGATAGAAGA GATTTTTACC 
AAGAAAGGAA AATCTTTTTT TAGAGATTTT GAGATAAAGA CATTAAAAGA TGTTTCGAAG 
CCAAAAAGTG TAATATCTAC AGGTGGTGGT CTTGGGGCTA ATGAAGAGGC TATGGAGTTT 
ATGAAAAAAA ATGGTTTTGT AGCTTTCTTG GATGTATCTT TTGAAGAATT TTACAACCGT 
TGCAAAGGTT TACCAAATAG ACCACTGCTT AGAAAATCTT TAGAGGAGCT TAGAAGCTTG 
CATAATAAAA GATACTACGT TTACAGTATG GCACATCAAC GTTTTGATGT TACCAAAAGC 
CCAGAAACCA TAGCAGAGGA TATAATAAAA CACTATGAGC AATTTAAAAG AGATATCAGA 
GCTTGTTAA
 
Protein sequence
MCSGKTSVGN ILSSMLNFAF IDVDKEIENR LNMTIEEIFT KKGKSFFRDF EIKTLKDVSK 
PKSVISTGGG LGANEEAMEF MKKNGFVAFL DVSFEEFYNR CKGLPNRPLL RKSLEELRSL 
HNKRYYVYSM AHQRFDVTKS PETIAEDIIK HYEQFKRDIR AC