Gene HY04AAS1_1018 details

Gene Information

• Locus tag: HY04AAS1_1018
• Symbol: smpB
• ID: 6743831
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Hydrogenobaculum sp. Y04AAS1
• Kingdom: Bacteria
• Replicon accession: NC_011126
• Strand: +
• Start bp: 952481
• End bp: 952957
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 642750824
• Product: SsrA-binding protein
• Protein accession: YP_002121682
• Protein GI: 195953392
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00000692219
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAC AAGAACAAAA TAATACACCA AGGTATGTAA ACAAAGAAGG CTTGCATGAA 
AATGAGGTTG TGGAAACTTA TCAAGCGGGT ATTGAGCTTT TAGGACCAGA AATAAAATCC 
ATAAGAAACA AACAAACCGT ATCTTTCAAA GATGCTTTTG TTAGGATAGA AAACGGCGAA 
GCATTTTTAC ACAACTTATA CATAGCTCCT TACAAGTACG CCACTATAAA ACCTCCGGAT 
CCACTTAGAA AGAGAAAGCT ACTTCTTCAT AAAAGGGAAA TTTTGAGGCT TTTAGGAAAA 
TCAAAGGAAA AAGGTTATAC GATAATACCG CTTAGCCTTT ACTTTAAAAA CGGCAAAGTA 
AAAGTAGATA TAGCTCTTGT CAAAGGTAAA AAACTTTACG ATAAAAGAAA AGAGCTAAAA 
GAAAAAGATA TAAAGAGAGA ACTACAAAGA GAGTTTAAAG GGAGAGTAAA GCTCTAA 

 

Protein sequence

MKKQEQNNTP RYVNKEGLHE NEVVETYQAG IELLGPEIKS IRNKQTVSFK DAFVRIENGE 
AFLHNLYIAP YKYATIKPPD PLRKRKLLLH KREILRLLGK SKEKGYTIIP LSLYFKNGKV 
KVDIALVKGK KLYDKRKELK EKDIKRELQR EFKGRVKL