| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0997 |
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| Symbol | lysS |
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| ID | 6743809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 932830 |
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| End bp | 934539 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642750802 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_002121661 |
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| Protein GI | 195953371 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00135477 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGAAT TTAGGAAAAA AAAGTTAGAA GAGCTTGCTA AAAGCCAAAA ACACGTCTAC
AAATATGAAT TTGAAAGCCC TTACTTTATT CACGATATAA GAGAGAAATA CGAAAAAGAA
CCAAGAAAAG ATAAAATTGT TGTAAAAGCC ACCATCAAAA GAGTTTCAAA AGTAGAAGAG
GGTTTTGTTT TAAGAATGAC TTCAGAAAGT GGCGTTGAAA TGCTTGCATA TACAAAAGAG
ACTTTCGAGC CAAACAAAGC TTACAACATA GAAGGTGTCC TATCAAGGGT AGAAGAAAAA
TTGAGCCTAA TAGATGCAAA ACCCACAGAA GAAACTCCCA CCACAAGCAT AGATGATATT
AAAAAAGAGC ACGATTTAGA TCCGAACTTT GAAGATATAT CGATAGCTGG AAGGCTTGTG
GCCTTGAGAA GCATGGGTAA GGCCATATTT GGACATATAC AAGATTTTAC TGGGAAATTA
CAGATATATA TTAAAAAAGA TATAGTAGGA GATGAGAAGT TTAAATTTGT AGAAGATTAT
ATAGATGTAG GAGATATAAT AGGCATAAAA GGAAAACTGT TTAGAACGCA TACCGGAGAG
CTCACCGTAG AAGTTTTTGA TATTGAGCTT TTAACAAAAG CCCTAAACAA CATGCCAGAA
AAATGGCATG GAATAAAAGA TATAGAAATA AAGTATAGAC AAAGATATTT AGATTTAATA
GCCAACGAAA GCTCTAGAAA GGTCTTTACT TTGAGATCAA AGATTATAAA AGCCCTTAGA
GATTTCTTTG ATAAAAACAA GTTCATGGAA GTAGAAACAC CAATTCTTCA GCCAATAGCA
TCAGGAGCTA CCGCAAGGCC TTTTGTTACA TATCACAACT ATTTAGAATC TGAGCTTTAC
CTTAGGATAG CACCAGAGCT TTATCTAAAA AAACTAATAG TGGGCGGTAT ACCAAGGGTA
TATGAGATTG GTAAAAACTT CAGAAACGAA GGCGTAGACA CTACGCACAA CCCAGAGTTT
ACCATGGTAG AATTTTACGC TGCTTATTGG GATTATAAAA AACTCATCAA GTTTACCGAA
GAGCTGTTTG ACTATCTCAC AGATATTACC GGTATCAAAA GCATAGAAAC TCAAAATGGT
GTTATAAACT TAAAGCCTCC TTTCAGAGTA GCTAAGTTTT TTGAGCTTTT AGAAGAAAAA
ACATCAAAAG ATAAAAGTTT TTTCCTACAC CATGAAGAAG AATTGAAGAA GTTTGCCAAC
GAGCTTGGCA TACCAAAAGC TTATACTTTA ACAAAACCAA AGCTTATAGA AAAAGTATTT
GAATATACAG TAGAAGACGA GCTTATCCAA CCTACTTTCA TCATAGATTT CCCGAAAATG
CTGTCCCCAC TTGCTAAAAC CCACAGAGAT GACGATGAGT TGGTGGAACG TTTTGAGCTT
TATATAAACA AAAAAGAAAT AGCAAATGCA TACTCAGAGT TAAACGACCC CGAAGACCAA
GCCAAGAGGT TTTTAGAACA AAAGCTTCAA AAAGCCACCG GTGACGAAGA AGCTATGGAA
ACTGATGATG ATTTTGTAGA GGCTCTTAGA TACGGTATGC CACCCACAGC CGGTGAAGGA
ATAGGGATAG ATAGACTCGT AATGCTCTTT GCAAACGTAG ACTCCATAAG GGATGTGATA
CTTTTCCCAG CCAACAGAAA GCTAGAATAA
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| Protein sequence | MEEFRKKKLE ELAKSQKHVY KYEFESPYFI HDIREKYEKE PRKDKIVVKA TIKRVSKVEE
GFVLRMTSES GVEMLAYTKE TFEPNKAYNI EGVLSRVEEK LSLIDAKPTE ETPTTSIDDI
KKEHDLDPNF EDISIAGRLV ALRSMGKAIF GHIQDFTGKL QIYIKKDIVG DEKFKFVEDY
IDVGDIIGIK GKLFRTHTGE LTVEVFDIEL LTKALNNMPE KWHGIKDIEI KYRQRYLDLI
ANESSRKVFT LRSKIIKALR DFFDKNKFME VETPILQPIA SGATARPFVT YHNYLESELY
LRIAPELYLK KLIVGGIPRV YEIGKNFRNE GVDTTHNPEF TMVEFYAAYW DYKKLIKFTE
ELFDYLTDIT GIKSIETQNG VINLKPPFRV AKFFELLEEK TSKDKSFFLH HEEELKKFAN
ELGIPKAYTL TKPKLIEKVF EYTVEDELIQ PTFIIDFPKM LSPLAKTHRD DDELVERFEL
YINKKEIANA YSELNDPEDQ AKRFLEQKLQ KATGDEEAME TDDDFVEALR YGMPPTAGEG
IGIDRLVMLF ANVDSIRDVI LFPANRKLE
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