| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0983 |
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| Symbol | |
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| ID | 6743795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 920084 |
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| End bp | 921367 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642750788 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_002121647 |
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| Protein GI | 195953357 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000232018 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAATAA AAAAAGTAGA GAAAATAGAA AAAGAACTAA GAGTACCATC AGACAAATCT
ATATCTCATA GAAGTGTAAT GTTTGGAGCT TTAGCAAGCG GTACATCGTA TATAAAAAAT
TGGCTAGTGG CAGAAGATAC TTTGGCTACG TTAGATATCT TTAGGAAGCT TGGCATAAAT
ATAAGAAGAG AAAACAACAT CTTAGAGATA AAGGGTGGTA AAGAATACTT CAAAGAACCA
GAAGATATAC TAGATGCAAA AAACTCCGGC ACCACCGCTA GAATAACGTC TGGTATATTG
GCAGGCTTTA ATTTTTTTAG CGTTTTAACA GGAGATGAAA GCCTCAAAAA AAGACCTATG
AAAAGGGTTA CAAGACCTCT ATCTTTGATG GGAGCTACAA TAATAGGAAG AGAAGATGCC
TCTTTGCTTC CTATAGCTAT AAAAGGTGGG GATTTAATAG GTGGTAGCTT TGAAAACAAA
GAAGCCTCTG CCCAAGTAAA ATCTTGTATT CTTTTGGCTG GATTTTTGGC AAAAGAAAAC
ACTATCACAG AGGTAATAGA GCCTTACACC TCAAGAGACC ATACCGAAAG GATGCTTTCT
AGCATGGGGG CAGATATAAA CATCATTTCC AATAATAAAC ATATAGTAAA GATAAAATCA
GGCGGAGTTT TAAATCCGAT AAATATAGAC GTACCAGCCG ATCCTTCTTC AGCAGCTTTT
ATAGCAGCCC TTGCGATACT TACCAAAGAT AGCTACGTTG TTTTAAAAGA TGTCCTTATA
AATCCAACCA GGGATGGGTT TTTTAGAAAA GCAAAAGACA TGGGAGCAAA TATAAACTAT
ATAAACAAAA GACATCAAAA CGGGGAAGAC ATAGCCGATA TAGAGGTTAG ATATTCACCA
AATTTAAAAG CAATAAGTAT AGATGAAAAG GATGTACCTT CTTTGATAGA TGAAATACCA
ATTTTATCTG TACTTATGTG CTTTGCAGAA GGTATTAGTT TGGTAAAAGG AGCAAAAGAA
CTAAGGAAAA AAGAAAGTGA CCGTATAAGA GCTATTTACG TAAATCTCAA AAATGCTGGA
GCCATCATAG AAGAATTTGA AGATGGTTTT AGCATAAAAG GTCCTTGCAA GCTAAAGCTA
AAAGAGATAA AATCTTTTAA AGACCATAGG ATTGCCATGA GTATGAGTAT ACTTGGTATG
GTGCTTGGAA CAGAAGCCGA GTTAGATGAC CCAGAATGTG TAAGCATATC TTATCCAAAC
TTCTTTCAAG GTATTTATTC TTAA
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| Protein sequence | MIIKKVEKIE KELRVPSDKS ISHRSVMFGA LASGTSYIKN WLVAEDTLAT LDIFRKLGIN
IRRENNILEI KGGKEYFKEP EDILDAKNSG TTARITSGIL AGFNFFSVLT GDESLKKRPM
KRVTRPLSLM GATIIGREDA SLLPIAIKGG DLIGGSFENK EASAQVKSCI LLAGFLAKEN
TITEVIEPYT SRDHTERMLS SMGADINIIS NNKHIVKIKS GGVLNPINID VPADPSSAAF
IAALAILTKD SYVVLKDVLI NPTRDGFFRK AKDMGANINY INKRHQNGED IADIEVRYSP
NLKAISIDEK DVPSLIDEIP ILSVLMCFAE GISLVKGAKE LRKKESDRIR AIYVNLKNAG
AIIEEFEDGF SIKGPCKLKL KEIKSFKDHR IAMSMSILGM VLGTEAELDD PECVSISYPN
FFQGIYS
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