Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0971 |
Symbol | |
ID | 6743783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 910299 |
End bp | 910940 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642750777 |
Product | HhH-GPD family protein |
Protein accession | YP_002121636 |
Protein GI | 195953346 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2231] Uncharacterized protein related to Endonuclease III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTGC TGGAGCTTTA TAACATTTTT CTTGATAGTT ATGGCTATCA AAACTGGTGG CCAGTAGATA TCGATTATCA TAAGACCTAT AACACAGATC CAAAAGATGA GATTATAATA GGAGCAATAC TTACCCAAAA CACAAACTGG AAAAACGTAG AAAAGGCTTT AGAAAACCTA AAAAATTATA AACTTTTAAG CCTAAAAGCT ATAAAACATG TAGATATAGA GCTTTTAAAA GAACTAATAA GACCATCTGG CTTTTTCCAA AGAAAAGCTA ATATACTAAA AGATGTATCA AATATAGAGT TCGAGCTCAC AAGAGAAATC CTTTTAAACA TTAAAGGTAT AGGGAAAGAA ACCGCCGACT CGATACTTCT ATACGCTTAC AACAAACCTT ATTTTGTGAT AGATATGTAT ACAAAAAGGA TTATAAAAAG GTTGTTTGGA CTTACCTTTA AAGAATACGA TGAATACGCA GATTTTATAA CTTCTAATAT TCCAAAGGAT ATAGATATAT ACAAAGAATA CCACGCACTT ATCGTAGAGC ATGCTAAAAG ATACTGCCAA AAAACTCCAA ACTGTGATGA GTGTATACTT AGAAACGCAT GTTTAAACAA AAATGTTATC TTTACCGTAT AA
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Protein sequence | MNLLELYNIF LDSYGYQNWW PVDIDYHKTY NTDPKDEIII GAILTQNTNW KNVEKALENL KNYKLLSLKA IKHVDIELLK ELIRPSGFFQ RKANILKDVS NIEFELTREI LLNIKGIGKE TADSILLYAY NKPYFVIDMY TKRIIKRLFG LTFKEYDEYA DFITSNIPKD IDIYKEYHAL IVEHAKRYCQ KTPNCDECIL RNACLNKNVI FTV
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