Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0927 |
Symbol | |
ID | 6743739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 874553 |
End bp | 875404 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642750733 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_002121592 |
Protein GI | 195953302 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000000224094 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGGTT TTTATATAGG CTATAAGCCG GTTGGTATAT CATCTTCAAA ATTTGTGCTT GATATATCTA AAAGCCTAAA TACAAAAGCA GGACATACTG GTACGCTTGA TTTAGAAGCA GAAGGTATAA TGATAATAGC TCTTGGGCAA GCCACCAAGT ATACGCAATA CTTCAATGTG CTCCCAAAAA TTTACGAGAC AAAAGGTATG CTTGGTATAA AAACAGACAC CCAGGATATC TCAGGAAATG TTATTCAGAA AATAGAAGAT GTAAATATAA CCTGTGAAGA GCTAAAAAGC ACCATTGAAA AATTCAAAGG CAAAATAACC CAAATACCCC CCATCTACTC CGCTAAAAAG ATAAACGGTA AAAAAGCTTA CAAATTAGCA AGAAAAAACC AAGTCCAAAG CATAGAGCTA AAACCTATAA CGGTGAATGT TTACAGTATT GAGCTTTTAG AATGCAACAT ACCTGAGTTT TATACAAAAG CTGTTGTTTC AACGGGGACT TACATAAGGA CGTTGATAAA CGATATAGGA GATACTCTAA AAGTGGGTGC TACTACGCTT ATTATAAAGC GTACCGCCGT AGGTAAATTT GGCAATGAAA GCGTAGGTAA GATTTATTCT ATTGAAGATG GTCTTTATTT TATACCGTCT TTACTATTAA AAGATGATAT CGTTAGGCGT TTAAAGCATG GTAAAGTAAT AAAATATGAA GCAAAAGACG GCGTATATAA ACTTTTATCG GAAGATGGAA TGTTTCACGG CGTTGTAGAG GTAAAAGATA ATGTTCTAAA AGCTTTAAGA ATGCAAAGCC AAGAAGATAA AAATCATATT GACAAAATAT AA
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Protein sequence | MDGFYIGYKP VGISSSKFVL DISKSLNTKA GHTGTLDLEA EGIMIIALGQ ATKYTQYFNV LPKIYETKGM LGIKTDTQDI SGNVIQKIED VNITCEELKS TIEKFKGKIT QIPPIYSAKK INGKKAYKLA RKNQVQSIEL KPITVNVYSI ELLECNIPEF YTKAVVSTGT YIRTLINDIG DTLKVGATTL IIKRTAVGKF GNESVGKIYS IEDGLYFIPS LLLKDDIVRR LKHGKVIKYE AKDGVYKLLS EDGMFHGVVE VKDNVLKALR MQSQEDKNHI DKI
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