| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0908 |
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| Symbol | |
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| ID | 6743720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 852916 |
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| End bp | 854622 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642750714 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002121573 |
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| Protein GI | 195953283 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTACA AAGAATATTT GGAAGCAAAG GGATTGCCAG ATACGGAAGA ATCAAAAAAC
AAATACTTCG AAGAGTATGG AAACCAGCTT CATAAATTTT TATATAGAGA TTTTTTAGAG
AGAGCAAAAG GGCTTTTAAA AGAAAGATAT GAAATTTTTC TACAAAAAAG AAGAGAACTT
GGAGAGCATG ATTTAAAGGT ATTAAATATA CTTGGCCTCA TCACATTTCA AGAACAAGTT
AAACTTTTTA TAGAGATAGC TTCATACTAT GCGCTTGAGC CAGAAGATGG TTATAATGTA
AACTTTACTA TAAAAAGCAT AGAAGCGGAT AGAATAATAG CTGACGAGGG TATAATAACC
TATATCCCAA TATATACTAA AGACAAGAAA AATTATCTTG TTTCTATATC AAAATTTGAG
GCTATAAAAA GGGATTACGC AGCTATATCT CAAGAATCAC AATTTATCAC AGATTTTAAG
GATATAGTAA AAGTAGCCCT TGCTAAAAAT GCTTCAGACC TTCACATAAA ACCAAAAGAC
AACTTTTACT ATGTATTTTT CAGGATAAAC AAAGATTTTG TAATGATGCC AAATATGACT
ATGCCAAAAT CTCAAGGTAT TCAGCTTGTT AGAAGCTTAA AAACCCAAGC TTCAAGATAT
ACAAAAGGCT CCTTTAACCC ATCCATATCT TCCCAAGTTC AAGACGCTCG TATTTCTTAC
GAAGATCTAT CCACCGATGT TAGGCTTGTG TTTGCCCCAA TGCCAAATCT AGAAGACGAG
ATGGTGGTAG GAAGATTGCT AAGGAAAAGG GGCATCCAAG GTAATCTTTC GAGGCTCGGA
TATCTTGAAA ACGACATAGC AATTCTACAA GATGCCATAA GCAGAAAAGG TGGGCTTTTT
GTCATAAGCG GCATCACAAA CTCCGGTAAA AGCATGGCTA TAGCTAGCAT GCTATCTACA
GTACAAGATA AGAATGTGCT CACAGTAGAA GACCCTGTTG AATACCAGAT TATAAACAAA
AATATAACGC AGTTTCAAAT ATTTGAAGCT CAAGTGGAAG AATTAAAATC AACGTTTGTA
GATTTTACAA AAGCCTTCAA AAGAGCGGAC CCAGACATAG TTTTTGTAGG CGAGTGGAGA
AACGAACAAG AACTTTCAAA GGCTATAGAA GAGCTAGCTT TTGCAGGTCA GCTTGTTTTT
ACCACGCTTC ATATAAATTC CGCCTTTGTA TTTTACGACG CCGTTAGCTC AATATTTCAC
GTAGATTACG AAAGCTCCGT AAGAATGCTT ATACTCAGCC TAAACCAGGT TTTAGTCAAA
AGCGTTTGTC CTCATTGTGC TATAGAGATG CCTATAAAAG ATGCATCACG GACAATCTCT
GATATAACGC TAAAGACACT CCCATATATC AACAAAGATG AATTTAGAGA TTTTATAAAC
CAAGATTTCC CAATAAAAGT AAGAAACGAA GCCGGCTGTC CAAAATGCGG CTTTACAGGA
TATGCAGGTC TTACGCCGAT ATACGAATAC ATGTATCCAG ACGTAAACAC AAAAGAATGG
ATAAGAAAAG ACAGACCGTC TTCTTATGAA ATAGAAGACC ATATAAGAAG AGAGCGTCTT
GGTAAAAACA AATTAGATGT ATACATGGAA AAGCTAAAAA CTGGTATAGT AGAGTTAAGC
CCACCAGTTT TAAATGCTTT GAGATAG
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| Protein sequence | MKYKEYLEAK GLPDTEESKN KYFEEYGNQL HKFLYRDFLE RAKGLLKERY EIFLQKRREL
GEHDLKVLNI LGLITFQEQV KLFIEIASYY ALEPEDGYNV NFTIKSIEAD RIIADEGIIT
YIPIYTKDKK NYLVSISKFE AIKRDYAAIS QESQFITDFK DIVKVALAKN ASDLHIKPKD
NFYYVFFRIN KDFVMMPNMT MPKSQGIQLV RSLKTQASRY TKGSFNPSIS SQVQDARISY
EDLSTDVRLV FAPMPNLEDE MVVGRLLRKR GIQGNLSRLG YLENDIAILQ DAISRKGGLF
VISGITNSGK SMAIASMLST VQDKNVLTVE DPVEYQIINK NITQFQIFEA QVEELKSTFV
DFTKAFKRAD PDIVFVGEWR NEQELSKAIE ELAFAGQLVF TTLHINSAFV FYDAVSSIFH
VDYESSVRML ILSLNQVLVK SVCPHCAIEM PIKDASRTIS DITLKTLPYI NKDEFRDFIN
QDFPIKVRNE AGCPKCGFTG YAGLTPIYEY MYPDVNTKEW IRKDRPSSYE IEDHIRRERL
GKNKLDVYME KLKTGIVELS PPVLNALR
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