| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0906 |
|---|
| Symbol | |
|---|
| ID | 6743718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 850009 |
|---|
| End bp | 851226 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 642750712 |
|---|
| Product | N-acetylmuramoyl-L-alanine amidase |
|---|
| Protein accession | YP_002121571 |
|---|
| Protein GI | 195953281 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 64 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAG TGAAAAAATA CTTGACGATT TTAGTAATAT TTTTGATTAG CTTTGTTAGT
TTTTCTTGGT CTAAGATAAT AGATGTAAGA AAGGGTTTAT ATCAGGATAA AATACGCTAT
GTATTTGATG TAAAAGATGT AAATATATAT AAAGTACGTC AAGAGGGTAG AAACATTATT
ATAGAAATAG GTGATAGAAA GTTTATATAT ACTATGACAT ACGTACCAGC TGCAGTAAAA
AGCTTTATGT TACAAAATCC AGAAAGAATA GTAATAGATA TATATAAGCC TAAGGCCTCT
CAAGATAGTA TTTTAAATAT AATATCTCCA AAGTACGCTT ACCTATTAAA GAAAAAACCA
AGTTTGGAAA ATACGGTTTA CGATAAAGGT GAAGATCCTT TAAGCGTAGT AGATAAAAAG
TATTTGGAAG CTATAGAAAA TTATGAAAAA CCTCAAAAAA CTTACAAATA TATACCACAT
CCACATGGGG TAAAAGTGGT GGTGATAGAT CCAGGACACG GCAGTAAGGA TTCTGGTGCT
ATAGGAATAG GTGGGGTAGA AGAAAAAAAT ATTGTATTGT CTATAGGTAA GAAGTTGGAT
TTTTTCTTGA AACATGACCC AAGGTTTAAA GTAATAATGA CAAGGGATAA AGATGTATTT
GTACCGCTTC AAGAAAGGGC TAGGATAGCC ATAGAAAATA GAGCGGATTT GTTTATAAGC
ATACATTGCA ACATGGCACC TGGTCATATT ACGTGGCCAC ATGGCACTAA CATATATTTT
CTATCTACTC CAGGTATAAA TATGAAGTAC AACGAGTTGG TAAACAACGA AGCCTTTTCT
CATCTTGTGT TTGGTAATGC TTTATACGAG CCAAGCTTAA GTGCTAAGAA AGTGTTAGCT
AGATTGGCTT TGGATGTTAC GAAAAACCAA AGCTTTGAAT TTGCTAAAGA TTTAGCTTAT
ACCTTAGACG AAGATTTGCA TAAGCATGTT GATATTCACA ACATACATAG AAGAAATTTT
GTAGTACTTA GAACTCCTGG TATACCATCT GTTTTAGTGG AAACTGGATT TATTAGCAAC
CCTCACGATG TAAAAGAACT TACAAACCCA TCTTACCAAT GGGCTTTTGC GAAAGCAATG
TACGAGGCCA TAGTAAATTA TTTCTTTGGT CAGCACAACA AAACACCACA AAACAATTTA
GCTTTAAAAG GTAGCTAA
|
|---|
| Protein sequence | MKKVKKYLTI LVIFLISFVS FSWSKIIDVR KGLYQDKIRY VFDVKDVNIY KVRQEGRNII
IEIGDRKFIY TMTYVPAAVK SFMLQNPERI VIDIYKPKAS QDSILNIISP KYAYLLKKKP
SLENTVYDKG EDPLSVVDKK YLEAIENYEK PQKTYKYIPH PHGVKVVVID PGHGSKDSGA
IGIGGVEEKN IVLSIGKKLD FFLKHDPRFK VIMTRDKDVF VPLQERARIA IENRADLFIS
IHCNMAPGHI TWPHGTNIYF LSTPGINMKY NELVNNEAFS HLVFGNALYE PSLSAKKVLA
RLALDVTKNQ SFEFAKDLAY TLDEDLHKHV DIHNIHRRNF VVLRTPGIPS VLVETGFISN
PHDVKELTNP SYQWAFAKAM YEAIVNYFFG QHNKTPQNNL ALKGS
|
|---|
| |